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bioconda / packages / ucsc-estorient

Read ESTs from a database and determine orientation based on estOrientInfo table or direction in gbCdnaInfo table. Update PSLs so that the strand reflects the direction of transcription. By default, PSLs where the direction can't be determined are dropped.

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Type Size Name Uploaded Downloads Labels
conda 2.0 MB | linux-64/ucsc-estorient-469-h664eb37_1.tar.bz2  3 months and 16 days ago 48 main
conda 2.0 MB | linux-64/ucsc-estorient-469-h9b8f530_0.tar.bz2  7 months and 18 hours ago 394 main
conda 188.5 kB | linux-64/ucsc-estorient-377-ha8a8165_3.tar.bz2  3 years and 2 months ago 355 main
conda 187.9 kB | linux-64/ucsc-estorient-377-h0b8a92a_2.tar.bz2  4 years and 2 days ago 214 main
conda 842.6 kB | osx-64/ucsc-estorient-377-h516baf0_1.tar.bz2  4 years and 7 months ago 94 main
conda 176.1 kB | linux-64/ucsc-estorient-377-h446ed27_1.tar.bz2  4 years and 7 months ago 191 main
conda 840.6 kB | linux-64/ucsc-estorient-377-h199ee4e_0.tar.bz2  6 years and 1 month ago 298 main
conda 789.8 kB | osx-64/ucsc-estorient-377-h8b15c51_0.tar.bz2  6 years and 1 month ago 4163 main
conda 2.5 MB | linux-64/ucsc-estorient-366-h5eb252a_0.tar.bz2  6 years and 9 months ago 487 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-366-h5eb252a_0.tar.bz2  6 years and 9 months ago 4314 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-h5eb252a_2.tar.bz2  6 years and 9 months ago 4046 main cf201901
conda 2.4 MB | linux-64/ucsc-estorient-357-1.tar.bz2  7 years and 1 month ago 512 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-1.tar.bz2  7 years and 1 month ago 313 main cf201901
conda 2.4 MB | linux-64/ucsc-estorient-357-0.tar.bz2  7 years and 4 months ago 738 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-0.tar.bz2  7 years and 4 months ago 76 main cf201901
conda 1.7 MB | osx-64/ucsc-estorient-332-0.tar.bz2  8 years and 9 months ago 8564 main cf201901
conda 1.7 MB | linux-64/ucsc-estorient-332-0.tar.bz2  8 years and 9 months ago 846 main cf201901
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