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bioconda / packages / ucsc-estorient

Read ESTs from a database and determine orientation based on estOrientInfo table or direction in gbCdnaInfo table. Update PSLs so that the strand reflects the direction of transcription. By default, PSLs where the direction can't be determined are dropped.

Type Size Name Uploaded Downloads Labels
conda 2.0 MB | linux-64/ucsc-estorient-469-h9b8f530_0.tar.bz2  3 months and 6 days ago 220 main
conda 188.5 kB | linux-64/ucsc-estorient-377-ha8a8165_3.tar.bz2  2 years and 10 months ago 329 main
conda 187.9 kB | linux-64/ucsc-estorient-377-h0b8a92a_2.tar.bz2  3 years and 8 months ago 189 main
conda 842.6 kB | osx-64/ucsc-estorient-377-h516baf0_1.tar.bz2  4 years and 3 months ago 89 main
conda 176.1 kB | linux-64/ucsc-estorient-377-h446ed27_1.tar.bz2  4 years and 3 months ago 164 main
conda 840.6 kB | linux-64/ucsc-estorient-377-h199ee4e_0.tar.bz2  5 years and 9 months ago 272 main
conda 789.8 kB | osx-64/ucsc-estorient-377-h8b15c51_0.tar.bz2  5 years and 9 months ago 4018 main
conda 2.5 MB | linux-64/ucsc-estorient-366-h5eb252a_0.tar.bz2  6 years and 5 months ago 460 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-366-h5eb252a_0.tar.bz2  6 years and 5 months ago 4168 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-h5eb252a_2.tar.bz2  6 years and 5 months ago 3901 main cf201901
conda 2.4 MB | linux-64/ucsc-estorient-357-1.tar.bz2  6 years and 9 months ago 483 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-1.tar.bz2  6 years and 10 months ago 306 main cf201901
conda 2.4 MB | linux-64/ucsc-estorient-357-0.tar.bz2  7 years and 16 days ago 707 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-0.tar.bz2  7 years and 16 days ago 69 main cf201901
conda 1.7 MB | osx-64/ucsc-estorient-332-0.tar.bz2  8 years and 6 months ago 8278 main cf201901
conda 1.7 MB | linux-64/ucsc-estorient-332-0.tar.bz2  8 years and 6 months ago 816 main cf201901

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