Read ESTs from a database and determine orientation based on estOrientInfo table or direction in gbCdnaInfo table. Update PSLs so that the strand reflects the direction of transcription. By default, PSLs where the direction can't be determined are dropped.
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Summary
Read ESTs from a database and determine orientation based on estOrientInfo table or direction in gbCdnaInfo table. Update PSLs so that the strand reflects the direction of transcription. By default, PSLs where the direction can't be determined are dropped.
Last Updated
Jun 29, 2025 at 21:39
License
Varies; see https://genome.ucsc.edu/license
Total Downloads
26.8K
Supported Platforms
GitHub Repository
https://github.com/ucscGenomeBrowser/kent