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bioconda / packages / ucsc-estorient

Read ESTs from a database and determine orientation based on estOrientInfo table or direction in gbCdnaInfo table. Update PSLs so that the strand reflects the direction of transcription. By default, PSLs where the direction can't be determined are dropped.

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Type Size Name Uploaded Downloads Labels
conda 2.0 MB | linux-64/ucsc-estorient-469-h664eb37_1.tar.bz2  3 months and 26 days ago 53 main
conda 2.0 MB | linux-64/ucsc-estorient-469-h9b8f530_0.tar.bz2  7 months and 11 days ago 418 main
conda 188.5 kB | linux-64/ucsc-estorient-377-ha8a8165_3.tar.bz2  3 years and 2 months ago 358 main
conda 187.9 kB | linux-64/ucsc-estorient-377-h0b8a92a_2.tar.bz2  4 years and 12 days ago 217 main
conda 842.6 kB | osx-64/ucsc-estorient-377-h516baf0_1.tar.bz2  4 years and 7 months ago 94 main
conda 176.1 kB | linux-64/ucsc-estorient-377-h446ed27_1.tar.bz2  4 years and 7 months ago 194 main
conda 840.6 kB | linux-64/ucsc-estorient-377-h199ee4e_0.tar.bz2  6 years and 1 month ago 301 main
conda 789.8 kB | osx-64/ucsc-estorient-377-h8b15c51_0.tar.bz2  6 years and 1 month ago 4180 main
conda 2.5 MB | linux-64/ucsc-estorient-366-h5eb252a_0.tar.bz2  6 years and 9 months ago 490 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-366-h5eb252a_0.tar.bz2  6 years and 9 months ago 4331 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-h5eb252a_2.tar.bz2  6 years and 9 months ago 4063 main cf201901
conda 2.4 MB | linux-64/ucsc-estorient-357-1.tar.bz2  7 years and 2 months ago 515 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-1.tar.bz2  7 years and 2 months ago 313 main cf201901
conda 2.4 MB | linux-64/ucsc-estorient-357-0.tar.bz2  7 years and 4 months ago 741 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-0.tar.bz2  7 years and 4 months ago 76 main cf201901
conda 1.7 MB | osx-64/ucsc-estorient-332-0.tar.bz2  8 years and 10 months ago 8598 main cf201901
conda 1.7 MB | linux-64/ucsc-estorient-332-0.tar.bz2  8 years and 10 months ago 849 main cf201901
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