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bioconda / packages / ucsc-estorient

Read ESTs from a database and determine orientation based on estOrientInfo table or direction in gbCdnaInfo table. Update PSLs so that the strand reflects the direction of transcription. By default, PSLs where the direction can't be determined are dropped.

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Type Size Name Uploaded Downloads Labels
conda 2.5 MB | linux-64/ucsc-estorient-366-h5eb252a_0.tar.bz2  7 years and 3 months ago 539 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-366-h5eb252a_0.tar.bz2  7 years and 3 months ago 4355 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-h5eb252a_2.tar.bz2  7 years and 3 months ago 4087 main cf201901
conda 2.4 MB | linux-64/ucsc-estorient-357-1.tar.bz2  7 years and 7 months ago 568 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-1.tar.bz2  7 years and 7 months ago 330 main cf201901
conda 2.4 MB | linux-64/ucsc-estorient-357-0.tar.bz2  7 years and 10 months ago 796 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-0.tar.bz2  7 years and 10 months ago 90 main cf201901
conda 1.7 MB | osx-64/ucsc-estorient-332-0.tar.bz2  9 years and 3 months ago 8635 main cf201901
conda 1.7 MB | linux-64/ucsc-estorient-332-0.tar.bz2  9 years and 3 months ago 900 main cf201901
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