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pbmm2
|
public |
A minimap2 frontend for PacBio native data formats
|
2025-04-22 |
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plasflow
|
public |
PlasFlow - predicting plasmid sequences in metagenomic data
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2025-04-22 |
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sumaclust
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public |
Sumaclust clusters sequences in a way that is fast and exact at the same time, using the same clustering algorithm as UCLUST and CD-HIT. For more information see url.
|
2025-04-22 |
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vargeno
|
public |
Fast SNP genotyping tool for whole genome sequence data and large SNP database.
|
2025-04-22 |
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python-consensuscore2
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public |
PacBio Arrow Consensus library for Sequel data
|
2025-04-22 |
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tagger
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public |
tagger allows you to tag a corpus of documents with search terms that you provide. It is often used to find mentions of proteins, species, diseases, tissues, chemicals and drugs, GO terms, and so forth, in articles in the Medline corpus.
|
2025-04-22 |
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cnvetti
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public |
CNVetti is a CNV caller from HTS data.
|
2025-04-22 |
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ditasic
|
public |
DiTASiC is designed as a comprehensive approach for abundance estimation and differential abundance assessment of individual taxa in metagenomics samples.
|
2025-04-22 |
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pbccs
|
public |
pbccs - Generate Highly Accurate Single-Molecule Consensus Reads (HiFi Reads)
|
2025-04-22 |
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banner
|
public |
BANNER is a tool that lives inside HULK and aims to make sense of hulk histosketches.
|
2025-04-22 |
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biobb_common
|
public |
Biobb_common is the base package required to use the biobb packages.
|
2025-04-22 |
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ksw
|
public |
Ksw: (interactive) smith-waterman in C
|
2025-04-22 |
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bioconductor-zinbwave
|
public |
Zero-Inflated Negative Binomial Model for RNA-Seq Data
|
2025-04-22 |
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tandem-genotypes
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public |
Find tandem repeat length changes, from "long" DNA reads aligned to a genome
|
2025-04-22 |
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perl-bio-tools-run-alignment-tcoffee
|
public |
Object for the calculation of a multiple sequence alignment from a set of unaligned sequences or alignments using the TCoffee program
|
2025-04-22 |
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perl-bio-tools-phylo-paml
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public |
Parses output from the PAML programs codeml, baseml, basemlg, codemlsites and yn00
|
2025-04-22 |
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perl-bio-tools-run-alignment-clustalw
|
public |
Object for the calculation of a multiple sequence alignment from a set of unaligned sequences or alignments using the Clustalw program
|
2025-04-22 |
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perl-bio-coordinate
|
public |
Methods for dealing with genomic coordinates.
|
2025-04-22 |
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pb-dazzler
|
public |
The Dresden Assembler suite -- Pacific Biosciences forks
|
2025-04-22 |
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t-coffee
|
public |
A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence
|
2025-04-22 |
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pbsv
|
public |
pbsv - PacBio structural variant (SV) calling and analysis tools
|
2025-04-22 |
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perl-test-requiresinternet
|
public |
Easily test network connectivity
|
2025-04-22 |
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nim-falcon
|
public |
Nim-based executables used by Falcon assembly workflow
|
2025-04-22 |
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faqcs
|
public |
Quality Control of Next Generation Sequencing Data.
|
2025-04-22 |
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hulk
|
public |
Histosketching Using Little Kmers
|
2025-04-22 |
