bioconductor-hmmcopy
Copy number prediction with correction for GC and mappability bias for HTS data
Copy number prediction with correction for GC and mappability bias for HTS data
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Corrects GC and mappability biases for readcounts (i.e. coverage) in non-overlapping windows of fixed length for single whole genome samples, yielding a rough estimate of copy number for furthur analysis. Designed for rapid correction of high coverage whole genome tumour and normal samples.
Summary
Copy number prediction with correction for GC and mappability bias for HTS data
Last Updated
Dec 14, 2024 at 14:52
License
GPL-3
Total Downloads
58.6K
Supported Platforms