bioconductor-hmmcopy
Copy number prediction with correction for GC and mappability bias for HTS data
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Description
Corrects GC and mappability biases for readcounts (i.e. coverage) in non-overlapping windows of fixed length for single whole genome samples, yielding a rough estimate of copy number for furthur analysis. Designed for rapid correction of high coverage whole genome tumour and normal samples.
About
Summary
Copy number prediction with correction for GC and mappability bias for HTS data
Last Updated
Feb 6, 2026 at 23:06
License
GPL-3.0-only
Total Downloads
59.7K
Version Downloads
184
Supported Platforms
linux-64
macOS-64
linux-aarch64
macOS-arm64