TransDecoder identifies candidate coding regions within transcript sequences, such as those generated by de novo RNA-Seq transcript assembly using Trinity, or constructed based on RNA-Seq alignments to the genome using Tophat and Cufflinks.
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Summary
TransDecoder identifies candidate coding regions within transcript sequences, such as those generated by de novo RNA-Seq transcript assembly using Trinity, or constructed based on RNA-Seq alignments to the genome using Tophat and Cufflinks.
Information Last Updated
Jul 16, 2025 at 22:27
License
Broad Institute
Total Downloads
204.5K
Platforms
GitHub Repository
https://github.com/TransDecoder/TransDecoder