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perl-mailtools
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public |
Various e-mail related modules.
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2025-08-15 |
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perl-sereal
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public |
Fast, compact, powerful binary (de-)serialization.
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2025-08-15 |
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perl-dbd-mysql
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public |
A MySQL driver for the Perl5 Database Interface (DBI).
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2025-08-15 |
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perl-sereal-encoder
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public |
Fast, compact, powerful binary serialization.
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2025-08-15 |
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perl-sereal-decoder
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public |
Fast, compact, powerful binary deserialization.
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2025-08-15 |
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selene-sdk
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public |
Framework for developing sequence-level deep learning networks.
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2025-08-14 |
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pytabix
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public |
Fast random access to sorted files compressed with bgzip and indexed by tabix.
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2025-08-14 |
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ucsc-newpythonprog
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public |
Make a skeleton for a new python program.
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2025-08-14 |
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panoct
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public |
PanOCT, Pan-genome Ortholog Clustering Tool, is a program for pan-genomic analysis of closely related prokaryotic species or strains
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2025-08-14 |
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lightassembler
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public |
Lightweight assembly algorithm designed to be executed on a desktop machine. It uses a pair of cache oblivious Bloom filters, one holding a uniform sample of g-spaced sequenced k-mers and the other holding k-mers classified as likely correct, using a simple statistical test.
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2025-08-14 |
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libstatgen
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public |
Useful set of classes for creating statistical genetic programs.
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2025-08-14 |
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checkm-genome
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public |
Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes.
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2025-08-14 |
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mapdia
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public |
Performs essential data preprocessing, including novel retention time-based normalization method and a sequence of peptide/fragment selection steps, and more importantly, hierarchical model-based statistical significance analysis for multi-group comparisons under representative experimental designs.
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2025-08-14 |
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mea
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public |
Mea was developed as part of the lab class "Bioinformatik von RNA- und Proteinstrukturen (Praktikum, Modul 10-202-2208)". The package predicts maximum expected accuracy (MEA) RNA secondary structures from dot plots of RNAs while correcting the score in dependence of base pair span. Furthermore, it provides tools to evaluate predictions and optimize parameters.
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2025-08-14 |
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livekraken
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public |
LiveKraken is a real-time metagenomic classifier for Illumina sequencing data.
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2025-08-14 |
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bioconductor-survcomp
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public |
Performance Assessment and Comparison for Survival Analysis
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2025-08-12 |
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t-coffee
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public |
A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence
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2025-08-12 |
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phylip
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public |
Package of programs for inferring phylogenies
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2025-08-12 |
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gustaf
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public |
Gustaf is a tool primarily designed for multi-split mapping of sequencing reads.
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2025-08-12 |
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kraken-ea
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public |
Kraken is a system for assigning taxonomic labels to short DNA sequences, usually obtained through metagenomic studies. This is a modified version allowing for splitting of fastq files based on read classifications.
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2025-08-11 |
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perl-test-script
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public |
Basic cross-platform tests for scripts
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2025-08-11 |
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blast
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public |
BLAST+ is a new suite of BLAST tools that utilizes the NCBI C++ Toolkit.
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2025-08-11 |
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stringtie
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public |
StringTie employs efficient algorithms for transcript structure recovery and abundance estimation from bulk RNA-Seq reads aligned to a reference genome.
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2025-08-11 |
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spectral_hk
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public |
No Summary
|
2025-08-11 |
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seqan_tcoffee
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public |
SeqAn::T-Coffee - Multiple Sequence Alignment
|
2025-08-11 |
