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bioconductor-hd2013sgi
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public |
Mapping genetic interactions in human cancer cells with RNAi and multiparametric phenotyping
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2025-04-22 |
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bioconductor-vidger
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public |
Create rapid visualizations of RNAseq data in R
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2025-04-22 |
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bioconductor-regionreport
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public |
Generate HTML or PDF reports for a set of genomic regions or DESeq2/edgeR results
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2025-04-22 |
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bioconductor-eegc
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public |
Engineering Evaluation by Gene Categorization (eegc)
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2025-04-22 |
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bioconductor-assign
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public |
Adaptive Signature Selection and InteGratioN (ASSIGN)
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2025-04-22 |
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r-smartsva
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public |
Introduces a fast and efficient Surrogate Variable Analysis algorithm that captures variation of unknown sources (batch effects) for high-dimensional data sets. The algorithm is built on the 'irwsva.build' function of the 'sva' package and proposes a revision on it that achieves an order of magnitude faster running time while trading no accuracy loss in return.
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2025-04-22 |
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bioconductor-diffcoexp
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public |
Differential Co-expression Analysis
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2025-04-22 |
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r-diffcorr
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public |
A method for identifying pattern changes between 2 experimental conditions in correlation networks (e.g., gene co-expression networks), which builds on a commonly used association measure, such as Pearson's correlation coefficient. This package includes functions to calculate correlation matrices for high-dimensional dataset and to test differential correlation, which means the changes in the correlation relationship among variables (e.g., genes and metabolites) between 2 experimental conditions.
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2025-04-22 |
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bioconductor-kissde
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public |
Retrieves Condition-Specific Variants in RNA-Seq Data
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2025-04-22 |
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bioconductor-impulsede2
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public |
Differential expression analysis of longitudinal count data sets
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2025-04-22 |
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bioconductor-gdcrnatools
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public |
GDCRNATools: an R/Bioconductor package for integrative analysis of lncRNA, mRNA, and miRNA data in GDC
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2025-04-22 |
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bioconductor-erssa
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public |
Empirical RNA-seq Sample Size Analysis
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2025-04-22 |
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bioconductor-anota2seq
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public |
Generally applicable transcriptome-wide analysis of translational efficiency using anota2seq
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2025-04-22 |
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bioconductor-scone
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public |
Single Cell Overview of Normalized Expression data
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2025-04-22 |
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bioconductor-msgbsr
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public |
msgbsR: methylation sensitive genotyping by sequencing (MS-GBS) R functions
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2025-04-22 |
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bioconductor-imetagene
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public |
A graphical interface for the metagene package
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2025-04-22 |
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bioconductor-metagene
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public |
A package to produce metagene plots
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2025-04-22 |
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bioconductor-props
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public |
PRObabilistic Pathway Score (PROPS)
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2025-04-22 |
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bioconductor-minfidataepic
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public |
Example data for the Illumina Methylation EPIC array
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2025-04-22 |
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bioconductor-minfidata
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public |
Example data for the Illumina Methylation 450k array
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2025-04-22 |
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bioconductor-methyvimdata
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public |
Example experimental data for use with the methyvim package
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2025-04-22 |
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bioconductor-methyvim
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public |
Targeted, Robust, and Model-free Differential Methylation Analysis
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2025-04-22 |
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bioconductor-methylaiddata
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public |
MethylAid-summarized data for 2800 Illumina 450k array samples and 2620 EPIC array samples
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2025-04-22 |
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bioconductor-methylaid
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public |
Visual and interactive quality control of large Illumina DNA Methylation array data sets
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2025-04-22 |
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bioconductor-flowsorted.blood.epic
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public |
Illumina EPIC data on immunomagnetic sorted peripheral adult blood cells
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2025-04-22 |
