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bioconda / packages

Package Name Access Summary Updated
bioconductor-mmagilentdesign026655.db public Agilent Chips that use Agilent design number 026655 annotation data (chip MmAgilentDesign026655) assembled using data from public repositories 2024-12-25
bioconductor-mogene21stprobeset.db public Affymetrix mogene21 annotation data (chip mogene21stprobeset) 2024-12-25
bioconductor-mgu74bv2.db public Affymetrix Affymetrix MG_U74Bv2 Array annotation data (chip mgu74bv2) 2024-12-25
bioconductor-m10kcod.db public Codelink UniSet Mouse I Bioarray (~10 000 mouse gene targets) annotation data (chip m10kcod) assembled using data from public repositories 2024-12-25
bioconductor-mta10probeset.db public Affymetrix mta10 annotation data (chip mta10probeset) 2024-12-25
bioconductor-illuminamousev1p1.db public Illumina MouseWG6v1p1 annotation data (chip illuminaMousev1p1) assembled using data from public repositories 2024-12-25
bioconductor-mogene11stprobeset.db public Affymetrix mogene11 annotation data (chip mogene11stprobeset) 2024-12-25
bioconductor-mogene10stprobeset.db public Affymetrix mogene10 annotation data (chip mogene10stprobeset) 2024-12-25
bioconductor-mu19ksubc.db public Affymetrix Affymetrix Mu19KsubC Array annotation data (chip mu19ksubc) 2024-12-25
bioconductor-iseetree public Interactive visualisation for microbiome data 2024-12-25
bioconductor-mu11ksubb.db public Affymetrix Affymetrix Mu11KsubB Array annotation data (chip mu11ksubb) 2024-12-25
bioconductor-mirnatap.db public This package holds the database for miRNAtap. 2024-12-25
r-garnett public Bioconda-installable version of Garnett cell classification tool. 2024-12-25
bioconductor-ecoli2.db public Affymetrix Affymetrix E_coli_2 Array annotation data (chip ecoli2) 2024-12-25
bioconductor-phantasus public Visual and interactive gene expression analysis 2024-12-25
r-sceasy public A package providing functions to convert between different single-cell data formats. 2024-12-25
bioconductor-scmultiome public Collection of Public Single-Cell Multiome (scATAC + scRNAseq) Datasets 2024-12-25
bioconductor-miaviz public Microbiome Analysis Plotting and Visualization 2024-12-25
bioconductor-alabaster.se public Load and Save SummarizedExperiments from File 2024-12-25
bioconductor-mgnifyr public R interface to EBI MGnify metagenomics resource 2024-12-25
bioconductor-rtnduals public Analysis of co-regulation and inference of 'dual regulons' 2024-12-25
bioconductor-dar public Differential Abundance Analysis by Consensus 2024-12-25
bioconductor-fletcher2013b public Master regulators of FGFR2 signalling and breast cancer risk 2024-12-25
bioconductor-curatedmetagenomicdata public Curated Metagenomic Data of the Human Microbiome 2024-12-25
bioconductor-egad public Extending guilt by association by degree 2024-12-25
bioconductor-gse13015 public GEO accession data GSE13015_GPL6106 as a SummarizedExperiment 2024-12-25
bioconductor-voyager public From geospatial to spatial omics 2024-12-25
bioconductor-gse103322 public GEO accession data GSE103322 as a SingleCellExperiment 2024-12-25
bioconductor-gse62944 public GEO accession data GSE62944 as a SummarizedExperiment 2024-12-25
bioconductor-dyebiasexamples public Example data for the dyebias package, which implements the GASSCO method. 2024-12-25
bioconductor-anota2seq public Generally applicable transcriptome-wide analysis of translational efficiency using anota2seq 2024-12-25
r-mams public R package for Matrix and Analysis Metadata Standards. 2024-12-25
bioconductor-zitools public Analysis of zero-inflated count data 2024-12-25
bioconductor-spaniel public Spatial Transcriptomics Analysis 2024-12-25
bioconductor-glimma public Interactive visualizations for gene expression analysis 2024-12-25
bioconductor-anaquin public Statistical analysis of sequins 2024-12-25
r-monocle3 public An analysis toolkit for single-cell RNA-seq. 2024-12-25
bioconductor-ebsea public Exon Based Strategy for Expression Analysis of genes 2024-12-25
bioconductor-mia public Microbiome analysis 2024-12-25
bioconductor-scgps public A complete analysis of single cell subpopulations, from identifying subpopulations to analysing their relationship (scGPS = single cell Global Predictions of Subpopulation) 2024-12-25
r-ampvis public No Summary 2024-12-25
bioconductor-sccb2 public CB2 improves power of cell detection in droplet-based single-cell RNA sequencing data 2024-12-25
r-lncpipereporter public Automatically Aggregating and Summarizing lncRNA Analysis Results for Interactive Report 2024-12-25
bioconductor-spatialfeatureexperiment public Integrating SpatialExperiment with Simple Features in sf 2024-12-25
bioconductor-vidger public Create rapid visualizations of RNAseq data in R 2024-12-25
r-riborex public Riborex is a R package for identification of differential translation from Ribo-seq data. 2024-12-25
bioconductor-deltacapturec public This Package Discovers Meso-scale Chromatin Remodeling from 3C Data 2024-12-25
bioconductor-desubs public DEsubs: an R package for flexible identification of differentially expressed subpathways using RNA-seq expression experiments 2024-12-25
bioconductor-multirnaflow public An R package for integrated analysis of temporal RNA-seq data with multiple biological conditions 2024-12-25
bioconductor-dropletutils public Utilities for Handling Single-Cell Droplet Data 2024-12-25

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