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Facilitates easy manipulation of variant call format (VCF) data. Functions are provided to rapidly read from and write to VCF files. Once VCF data is read into R a parser function extracts matrices of data. This information can then be used for quality control or other purposes. Additional functions provide visualization of genomic data. Once processing is complete data may be written to a VCF file (*.vcf.gz). It also may be converted into other popular R objects (e.g., genlight, DNAbin). VcfR provides a link between VCF data and familiar R software.

Type Size Name Uploaded Downloads Labels
conda 1.7 MB | linux-64/r-vcfr-1.8.0-r36h0357c0b_3.tar.bz2  5 years and 4 months ago 790 main
conda 1.7 MB | osx-64/r-vcfr-1.8.0-r36hf99fc2c_3.tar.bz2  5 years and 4 months ago 3215 main
conda 1.7 MB | osx-64/r-vcfr-1.8.0-r36hf99fc2c_2.tar.bz2  5 years and 6 months ago 208 main
conda 1.7 MB | linux-64/r-vcfr-1.8.0-r36h0357c0b_2.tar.bz2  5 years and 6 months ago 351 main
conda 1.7 MB | linux-64/r-vcfr-1.8.0-r351h29659fb_1.tar.bz2  6 years and 2 months ago 670 main gcc7
conda 1.7 MB | osx-64/r-vcfr-1.8.0-r351h466af19_1.tar.bz2  6 years and 2 months ago 110 main gcc7
conda 1.6 MB | linux-64/r-vcfr-1.8.0-r341h9d2a408_0.tar.bz2  6 years and 4 months ago 714 main cf201901
conda 1.8 MB | linux-64/r-vcfr-1.8.0-r351h9d2a408_0.tar.bz2  6 years and 4 months ago 350 main cf201901
conda 1.7 MB | osx-64/r-vcfr-1.8.0-r351h9d2a408_0.tar.bz2  6 years and 4 months ago 290 main cf201901
conda 1.6 MB | osx-64/r-vcfr-1.8.0-r341h9d2a408_0.tar.bz2  6 years and 4 months ago 355 main cf201901
conda 2.6 MB | osx-64/r-vcfr-1.5.0-r3.4.1_0.tar.bz2  7 years and 3 months ago 4315 main cf201901
conda 2.7 MB | linux-64/r-vcfr-1.5.0-r3.4.1_0.tar.bz2  7 years and 3 months ago 1074 main cf201901

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