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Facilitates easy manipulation of variant call format (VCF) data. Functions are provided to rapidly read from and write to VCF files. Once VCF data is read into R a parser function extracts matrices of data. This information can then be used for quality control or other purposes. Additional functions provide visualization of genomic data. Once processing is complete data may be written to a VCF file (*.vcf.gz). It also may be converted into other popular R objects (e.g., genlight, DNAbin). VcfR provides a link between VCF data and familiar R software.

Type Size Name Uploaded Downloads Labels
conda 1.7 MB | linux-64/r-vcfr-1.8.0-r36h0357c0b_3.tar.bz2  5 years and 3 months ago 777 main
conda 1.7 MB | osx-64/r-vcfr-1.8.0-r36hf99fc2c_3.tar.bz2  5 years and 3 months ago 3212 main
conda 1.7 MB | osx-64/r-vcfr-1.8.0-r36hf99fc2c_2.tar.bz2  5 years and 5 months ago 206 main
conda 1.7 MB | linux-64/r-vcfr-1.8.0-r36h0357c0b_2.tar.bz2  5 years and 5 months ago 343 main
conda 1.7 MB | linux-64/r-vcfr-1.8.0-r351h29659fb_1.tar.bz2  6 years and 1 month ago 662 main gcc7
conda 1.7 MB | osx-64/r-vcfr-1.8.0-r351h466af19_1.tar.bz2  6 years and 1 month ago 107 main gcc7
conda 1.6 MB | linux-64/r-vcfr-1.8.0-r341h9d2a408_0.tar.bz2  6 years and 3 months ago 704 main cf201901
conda 1.8 MB | linux-64/r-vcfr-1.8.0-r351h9d2a408_0.tar.bz2  6 years and 3 months ago 342 main cf201901
conda 1.7 MB | osx-64/r-vcfr-1.8.0-r351h9d2a408_0.tar.bz2  6 years and 3 months ago 288 main cf201901
conda 1.6 MB | osx-64/r-vcfr-1.8.0-r341h9d2a408_0.tar.bz2  6 years and 3 months ago 353 main cf201901

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