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Facilitates easy manipulation of variant call format (VCF) data. Functions are provided to rapidly read from and write to VCF files. Once VCF data is read into R a parser function extracts matrices of data. This information can then be used for quality control or other purposes. Additional functions provide visualization of genomic data. Once processing is complete data may be written to a VCF file (*.vcf.gz). It also may be converted into other popular R objects (e.g., genlight, DNAbin). VcfR provides a link between VCF data and familiar R software.

Type Size Name Uploaded Downloads Labels
conda 1.7 MB | linux-64/r-vcfr-1.8.0-r36h0357c0b_3.tar.bz2  5 years and 3 months ago 778 main
conda 1.7 MB | osx-64/r-vcfr-1.8.0-r36hf99fc2c_3.tar.bz2  5 years and 3 months ago 3212 main
conda 1.7 MB | osx-64/r-vcfr-1.8.0-r36hf99fc2c_2.tar.bz2  5 years and 5 months ago 207 main
conda 1.7 MB | linux-64/r-vcfr-1.8.0-r36h0357c0b_2.tar.bz2  5 years and 5 months ago 343 main
conda 1.7 MB | linux-64/r-vcfr-1.8.0-r351h29659fb_1.tar.bz2  6 years and 1 month ago 662 main gcc7
conda 1.7 MB | osx-64/r-vcfr-1.8.0-r351h466af19_1.tar.bz2  6 years and 1 month ago 108 main gcc7
conda 1.6 MB | linux-64/r-vcfr-1.8.0-r341h9d2a408_0.tar.bz2  6 years and 3 months ago 705 main cf201901
conda 1.8 MB | linux-64/r-vcfr-1.8.0-r351h9d2a408_0.tar.bz2  6 years and 3 months ago 342 main cf201901
conda 1.7 MB | osx-64/r-vcfr-1.8.0-r351h9d2a408_0.tar.bz2  6 years and 3 months ago 289 main cf201901
conda 1.6 MB | osx-64/r-vcfr-1.8.0-r341h9d2a408_0.tar.bz2  6 years and 3 months ago 354 main cf201901
conda 2.6 MB | osx-64/r-vcfr-1.5.0-r3.4.1_0.tar.bz2  7 years and 2 months ago 4294 main cf201901
conda 2.7 MB | linux-64/r-vcfr-1.5.0-r3.4.1_0.tar.bz2  7 years and 2 months ago 1065 main cf201901

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