bioconda / packages / bioconductor-bsgenome.mmusculus.ucsc.mm9.masked

Full genome sequences for Mus musculus (Mouse) as provided by UCSC (mm9, Jul. 2007) and stored in Biostrings objects. The sequences are the same as in BSgenome.Mmusculus.UCSC.mm9, except that each of them has the 4 following masks on top: (1) the mask of assembly gaps (AGAPS mask), (2) the mask of intra-contig ambiguities (AMB mask), (3) the mask of repeats from RepeatMasker (RM mask), and (4) the mask of repeats from Tandem Repeats Finder (TRF mask). Only the AGAPS and AMB masks are "active" by default.

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conda 8.2 kB | noarch/bioconductor-bsgenome.mmusculus.ucsc.mm9.masked-1.3.99-r41hdfd78af_8.tar.bz2  2 months and 13 days ago bioconda 143 main
conda 8.1 kB | noarch/bioconductor-bsgenome.mmusculus.ucsc.mm9.masked-1.3.99-r41hdfd78af_7.tar.bz2  7 months and 18 days ago bioconda 167 main
conda 8.0 kB | noarch/bioconductor-bsgenome.mmusculus.ucsc.mm9.masked-1.3.99-r40hdfd78af_6.tar.bz2  9 months and 18 days ago bioconda 45 main
conda 7.7 kB | noarch/bioconductor-bsgenome.mmusculus.ucsc.mm9.masked-1.3.99-r40_5.tar.bz2  1 year and 2 months ago bioconda 59 main
conda 7.5 kB | noarch/bioconductor-bsgenome.mmusculus.ucsc.mm9.masked-1.3.99-r40_4.tar.bz2  1 year and 8 months ago bioconda 68 main
conda 7.2 kB | noarch/bioconductor-bsgenome.mmusculus.ucsc.mm9.masked-1.3.99-r36_3.tar.bz2  2 years and 2 months ago bioconda 92 main
conda 7.1 kB | noarch/bioconductor-bsgenome.mmusculus.ucsc.mm9.masked-1.3.99-r36_2.tar.bz2  2 years and 5 months ago bioconda 93 main
conda 6.5 kB | noarch/bioconductor-bsgenome.mmusculus.ucsc.mm9.masked-1.3.99-r351_0.tar.bz2  3 years and 1 month ago bioconda 140 main gcc7
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