About Anaconda Help Download Anaconda

bioconda / packages / bioconductor-bsgenome.mmusculus.ucsc.mm9.masked

Full genome sequences for Mus musculus (Mouse) as provided by UCSC (mm9, Jul. 2007) and stored in Biostrings objects. The sequences are the same as in BSgenome.Mmusculus.UCSC.mm9, except that each of them has the 4 following masks on top: (1) the mask of assembly gaps (AGAPS mask), (2) the mask of intra-contig ambiguities (AMB mask), (3) the mask of repeats from RepeatMasker (RM mask), and (4) the mask of repeats from Tandem Repeats Finder (TRF mask). Only the AGAPS and AMB masks are "active" by default.

Type Size Name Uploaded Downloads Labels
conda 9.3 kB | noarch/bioconductor-bsgenome.mmusculus.ucsc.mm9.masked-1.3.99-r44hdfd78af_13.tar.bz2  7 months and 22 days ago 241 main
conda 9.3 kB | noarch/bioconductor-bsgenome.mmusculus.ucsc.mm9.masked-1.3.99-r43hdfd78af_12.tar.bz2  1 year and 8 months ago 824 main
conda 9.2 kB | noarch/bioconductor-bsgenome.mmusculus.ucsc.mm9.masked-1.3.99-r43hdfd78af_11.tar.bz2  2 years and 1 month ago 409 main
conda 8.7 kB | noarch/bioconductor-bsgenome.mmusculus.ucsc.mm9.masked-1.3.99-r42hdfd78af_10.tar.bz2  2 years and 9 months ago 633 main
conda 9.1 kB | noarch/bioconductor-bsgenome.mmusculus.ucsc.mm9.masked-1.3.99-r41hdfd78af_9.tar.bz2  2 years and 11 months ago 259 main
conda 8.2 kB | noarch/bioconductor-bsgenome.mmusculus.ucsc.mm9.masked-1.3.99-r41hdfd78af_8.tar.bz2  3 years and 9 months ago 698 main
conda 8.1 kB | noarch/bioconductor-bsgenome.mmusculus.ucsc.mm9.masked-1.3.99-r41hdfd78af_7.tar.bz2  4 years and 2 months ago 339 main
conda 8.0 kB | noarch/bioconductor-bsgenome.mmusculus.ucsc.mm9.masked-1.3.99-r40hdfd78af_6.tar.bz2  4 years and 4 months ago 210 main
conda 7.7 kB | noarch/bioconductor-bsgenome.mmusculus.ucsc.mm9.masked-1.3.99-r40_5.tar.bz2  4 years and 9 months ago 215 main
conda 7.5 kB | noarch/bioconductor-bsgenome.mmusculus.ucsc.mm9.masked-1.3.99-r40_4.tar.bz2  5 years and 3 months ago 238 main
conda 7.2 kB | noarch/bioconductor-bsgenome.mmusculus.ucsc.mm9.masked-1.3.99-r36_3.tar.bz2  5 years and 9 months ago 267 main
conda 7.1 kB | noarch/bioconductor-bsgenome.mmusculus.ucsc.mm9.masked-1.3.99-r36_2.tar.bz2  6 years and 8 days ago 265 main
conda 6.5 kB | noarch/bioconductor-bsgenome.mmusculus.ucsc.mm9.masked-1.3.99-r351_0.tar.bz2  6 years and 8 months ago 315 main gcc7

© 2025 Anaconda, Inc. All Rights Reserved. (v4.2.0) Legal | Privacy Policy