• linux-64 v3.0.11
• osx-64 v3.0.11
• win-64 v3.0.11

conda install

To install this package run one of the following:
conda install mosaic::timagetk

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TimageTK (Tissue Image Toolkit) is a Python package dedicated to image processing of multicellular architectures, such as plants or animals. It is intended for biologists, modellers and computer scientists.

The package provides the following main functionalities:

• Image Filtering: gaussian smoothing, gradient, hessian, laplacian, ...
• Mathematical Morphology: erosion, dilation, opening, closing, hat transform, sequential filters, ...
• Intensity Image Registration: rigid, affine and deformable registration, composition of transformations, sequence registration, multi-view fusion, ...
• Intensity Image Segmentation: h-transform, connected-component labeling, watershed, ...
• Visualisation: Stack browser, orthogonal views, projection maps and other GUI.
• Batch Processing: A simple JSON-based data structure allows the easy batch processing of large data sets.

Read TimageTK documentation for more detailed information.