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Facilitates easy manipulation of variant call format (VCF) data. Functions are provided to rapidly read from and write to VCF files. Once VCF data is read into R a parser function extracts matrices of data. This information can then be used for quality control or other purposes. Additional functions provide visualization of genomic data. Once processing is complete data may be written to a VCF file (*.vcf.gz). It also may be converted into other popular R objects (e.g., genlight, DNAbin). VcfR provides a link between VCF data and familiar R software.

copied from cf-staging / r-vcfr
Type Size Name Uploaded Downloads Labels
conda 1.7 MB | win-64/r-vcfr-1.14.0-r41h67098fc_1.conda  1 year and 5 months ago 434 main
conda 1.6 MB | osx-64/r-vcfr-1.14.0-r43ha73a074_1.conda  1 year and 5 months ago 252 main
conda 1.6 MB | osx-64/r-vcfr-1.14.0-r42ha73a074_1.conda  1 year and 5 months ago 236 main
conda 1.7 MB | linux-64/r-vcfr-1.14.0-r43h33b523d_1.conda  1 year and 5 months ago 1451 main
conda 1.7 MB | linux-64/r-vcfr-1.14.0-r42h33b523d_1.conda  1 year and 5 months ago 1402 main
conda 1.7 MB | win-64/r-vcfr-1.14.0-r41h67098fc_0.conda  1 year and 10 months ago 565 main
conda 1.6 MB | osx-64/r-vcfr-1.14.0-r41h32f0767_0.conda  1 year and 10 months ago 226 main
conda 1.6 MB | osx-64/r-vcfr-1.14.0-r42h32f0767_0.conda  1 year and 10 months ago 232 main
conda 1.7 MB | linux-64/r-vcfr-1.14.0-r41h58bca29_0.conda  1 year and 10 months ago 2146 main
conda 1.7 MB | linux-64/r-vcfr-1.14.0-r42h58bca29_0.conda  1 year and 10 months ago 1709 main

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