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A toolkit for working with Biological Observation Matrix ('BIOM') files. Features include reading/writing all 'BIOM' formats, rarefaction, alpha diversity, beta diversity (including 'UniFrac'), summarizing counts by taxonomic level, and sample subsetting. Standalone functions for reading, writing, and subsetting phylogenetic trees are also provided. All CPU intensive operations are encoded in C with multi-thread support.

copied from cf-staging / r-rbiom
Type Size Name Uploaded Downloads Labels
conda 1.6 MB | linux-aarch64/r-rbiom-2.0.10-r44h9d76b47_0.conda  3 days and 4 hours ago 13 main
conda 1.5 MB | linux-aarch64/r-rbiom-2.0.10-r43h9d76b47_0.conda  3 days and 4 hours ago 16 main
conda 1.6 MB | osx-arm64/r-rbiom-2.0.10-r44h31118f2_0.conda  3 days and 10 hours ago 21 main
conda 1.5 MB | osx-arm64/r-rbiom-2.0.10-r43h31118f2_0.conda  3 days and 10 hours ago 18 main
conda 1.5 MB | osx-64/r-rbiom-2.0.10-r43h2711daa_0.conda  3 days and 10 hours ago 21 main
conda 1.6 MB | osx-64/r-rbiom-2.0.10-r44h2711daa_0.conda  3 days and 10 hours ago 22 main
conda 1.6 MB | linux-64/r-rbiom-2.0.10-r44h93ab643_0.conda  3 days and 10 hours ago 49 main
conda 1.5 MB | linux-64/r-rbiom-2.0.10-r43h93ab643_0.conda  3 days and 10 hours ago 46 main

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