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Provides quality control (QC), normalization, and batch effect correction operations for 'NanoString nCounter' data, Talhouk et al. (2016) <doi:10.1371/journal.pone.0153844>. Various metrics are used to determine which samples passed or failed QC. Gene expression should first be normalized to housekeeping genes, before a reference-based approach is used to adjust for batch effects. Raw NanoString data can be imported in the form of Reporter Code Count (RCC) files.

copied from cf-staging / r-nanostringr
Type Size Name Uploaded Downloads Labels
conda 574.5 kB | noarch/r-nanostringr-0.4.0-r42hc72bb7e_2.conda  1 year and 5 months ago 884 main
conda 573.8 kB | noarch/r-nanostringr-0.4.0-r43hc72bb7e_2.conda  1 year and 5 months ago 903 main
conda 605.6 kB | noarch/r-nanostringr-0.4.0-r42hc72bb7e_1.tar.bz2  2 years and 1 month ago 1289 main
conda 605.9 kB | noarch/r-nanostringr-0.4.0-r41hc72bb7e_1.tar.bz2  2 years and 1 month ago 1236 main
conda 605.8 kB | noarch/r-nanostringr-0.4.0-r40hc72bb7e_0.tar.bz2  2 years and 3 months ago 1446 main
conda 605.9 kB | noarch/r-nanostringr-0.4.0-r41hc72bb7e_0.tar.bz2  2 years and 3 months ago 1474 main

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