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Given a group of genomes and their relationship with each other, the package clusters the genomes and selects the most representative members of each cluster. Additional data can be provided to the prioritize certain genomes. The results can be printed out as a list or a new phylogeny with graphs of the trees and distance distributions also available. For detailed introduction see: Thomas H Clarke, Lauren M Brinkac, Granger Sutton, and Derrick E Fouts (2018), GGRaSP: a R-package for selecting representative genomes using Gaussian mixture models, Bioinformatics, bty300, <doi:10.1093/bioinformatics/bty300>.

copied from cf-staging / r-ggrasp
Type Size Name Uploaded Downloads Labels
conda 889.5 kB | noarch/r-ggrasp-1.2-r44hc72bb7e_3.conda  6 months and 18 days ago 588 main
conda 885.0 kB | noarch/r-ggrasp-1.2-r43hc72bb7e_3.conda  6 months and 18 days ago 584 main
conda 889.8 kB | noarch/r-ggrasp-1.2-r43hc72bb7e_2.conda  1 year and 8 months ago 1116 main
conda 880.3 kB | noarch/r-ggrasp-1.2-r42hc72bb7e_2.conda  1 year and 8 months ago 1155 main
conda 1.3 MB | noarch/r-ggrasp-1.2-r42hc72bb7e_1.tar.bz2  2 years and 5 months ago 1413 main
conda 1.3 MB | noarch/r-ggrasp-1.2-r41hc72bb7e_1.tar.bz2  2 years and 5 months ago 1425 main
conda 1.3 MB | noarch/r-ggrasp-1.2-r40hc72bb7e_0.tar.bz2  2 years and 10 months ago 2018 main
conda 1.3 MB | noarch/r-ggrasp-1.2-r41hc72bb7e_0.tar.bz2  2 years and 10 months ago 2010 main

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