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Given a group of genomes and their relationship with each other, the package clusters the genomes and selects the most representative members of each cluster. Additional data can be provided to the prioritize certain genomes. The results can be printed out as a list or a new phylogeny with graphs of the trees and distance distributions also available. For detailed introduction see: Thomas H Clarke, Lauren M Brinkac, Granger Sutton, and Derrick E Fouts (2018), GGRaSP: a R-package for selecting representative genomes using Gaussian mixture models, Bioinformatics, bty300, <doi:10.1093/bioinformatics/bty300>.

copied from cf-staging / r-ggrasp
Type Size Name Uploaded Downloads Labels
conda 889.5 kB | noarch/r-ggrasp-1.2-r44hc72bb7e_3.conda  1 year and 11 days ago 920 main
conda 885.0 kB | noarch/r-ggrasp-1.2-r43hc72bb7e_3.conda  1 year and 11 days ago 898 main
conda 889.8 kB | noarch/r-ggrasp-1.2-r43hc72bb7e_2.conda  2 years and 2 months ago 1430 main
conda 880.3 kB | noarch/r-ggrasp-1.2-r42hc72bb7e_2.conda  2 years and 2 months ago 1488 main
conda 1.3 MB | noarch/r-ggrasp-1.2-r42hc72bb7e_1.tar.bz2  2 years and 10 months ago 1733 main
conda 1.3 MB | noarch/r-ggrasp-1.2-r41hc72bb7e_1.tar.bz2  2 years and 10 months ago 1732 main
conda 1.3 MB | noarch/r-ggrasp-1.2-r40hc72bb7e_0.tar.bz2  3 years and 4 months ago 2335 main
conda 1.3 MB | noarch/r-ggrasp-1.2-r41hc72bb7e_0.tar.bz2  3 years and 4 months ago 2315 main

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