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Given a group of genomes and their relationship with each other, the package clusters the genomes and selects the most representative members of each cluster. Additional data can be provided to the prioritize certain genomes. The results can be printed out as a list or a new phylogeny with graphs of the trees and distance distributions also available. For detailed introduction see: Thomas H Clarke, Lauren M Brinkac, Granger Sutton, and Derrick E Fouts (2018), GGRaSP: a R-package for selecting representative genomes using Gaussian mixture models, Bioinformatics, bty300, <doi:10.1093/bioinformatics/bty300>.

copied from cf-staging / r-ggrasp
Type Size Name Uploaded Downloads Labels
conda 1.3 MB | noarch/r-ggrasp-1.0-r40hc72bb7e_1.tar.bz2  3 years and 10 months ago 2164 main
conda 1.3 MB | noarch/r-ggrasp-1.0-r41hc72bb7e_1.tar.bz2  3 years and 10 months ago 2158 main
conda 1.3 MB | noarch/r-ggrasp-1.0-r40h6115d3f_1.tar.bz2  4 years and 11 months ago 3006 main
conda 1.3 MB | noarch/r-ggrasp-1.0-r36h6115d3f_1.tar.bz2  4 years and 11 months ago 3003 main
conda 1.3 MB | noarch/r-ggrasp-1.0-r36h6115d3f_0.tar.bz2  5 years and 6 months ago 3711 main cf202003
conda 1.2 MB | noarch/r-ggrasp-1.0-r35h6115d3f_0.tar.bz2  5 years and 6 months ago 3720 main cf202003

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