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Given a group of genomes and their relationship with each other, the package clusters the genomes and selects the most representative members of each cluster. Additional data can be provided to the prioritize certain genomes. The results can be printed out as a list or a new phylogeny with graphs of the trees and distance distributions also available. For detailed introduction see: Thomas H Clarke, Lauren M Brinkac, Granger Sutton, and Derrick E Fouts (2018), GGRaSP: a R-package for selecting representative genomes using Gaussian mixture models, Bioinformatics, bty300, <doi:10.1093/bioinformatics/bty300>.

copied from cf-staging / r-ggrasp
Type Size Name Uploaded Downloads Labels
conda 889.5 kB | noarch/r-ggrasp-1.2-r44hc72bb7e_3.conda  6 months and 5 days ago 564 main
conda 885.0 kB | noarch/r-ggrasp-1.2-r43hc72bb7e_3.conda  6 months and 5 days ago 562 main
conda 889.8 kB | noarch/r-ggrasp-1.2-r43hc72bb7e_2.conda  1 year and 8 months ago 1092 main
conda 880.3 kB | noarch/r-ggrasp-1.2-r42hc72bb7e_2.conda  1 year and 8 months ago 1132 main
conda 1.3 MB | noarch/r-ggrasp-1.2-r42hc72bb7e_1.tar.bz2  2 years and 4 months ago 1389 main
conda 1.3 MB | noarch/r-ggrasp-1.2-r41hc72bb7e_1.tar.bz2  2 years and 4 months ago 1398 main
conda 1.3 MB | noarch/r-ggrasp-1.2-r40hc72bb7e_0.tar.bz2  2 years and 10 months ago 1993 main
conda 1.3 MB | noarch/r-ggrasp-1.2-r41hc72bb7e_0.tar.bz2  2 years and 10 months ago 1988 main

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