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We present DRaWR, a network-based method for ranking genes or properties related to a given gene set. Such related genes or properties are identified from among the nodes of a large, heterogeneous network of biological information. Our method involves a random walk with restarts, performed on an initial network with multiple node and edge types, preserving more of the original, specific property information than current methods that operate on homogeneous networks. In this first stage of our algorithm, we find the properties that are the most relevant to the given gene set and extract a subnetwork of the original network, comprising only the relevant properties. We then rerank genes by their similarity to the given gene set, based on a second random walk with restarts, performed on the above subnetwork.

copied from cf-staging / r-drawr
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conda 58.7 kB | noarch/r-drawr-1.0.3-r44hc72bb7e_3.conda  7 months and 27 days ago 596 main
conda 59.0 kB | noarch/r-drawr-1.0.3-r43hc72bb7e_3.conda  7 months and 27 days ago 589 main
conda 59.1 kB | noarch/r-drawr-1.0.3-r43hc72bb7e_2.conda  1 year and 8 months ago 1047 main
conda 59.0 kB | noarch/r-drawr-1.0.3-r42hc72bb7e_2.conda  1 year and 8 months ago 1018 main
conda 59.0 kB | noarch/r-drawr-1.0.3-r42hc72bb7e_1.tar.bz2  2 years and 4 months ago 1399 main
conda 59.0 kB | noarch/r-drawr-1.0.3-r41hc72bb7e_1.tar.bz2  2 years and 4 months ago 1395 main
conda 58.4 kB | noarch/r-drawr-1.0.3-r40hc72bb7e_0.tar.bz2  2 years and 11 months ago 1972 main
conda 58.5 kB | noarch/r-drawr-1.0.3-r41hc72bb7e_0.tar.bz2  2 years and 11 months ago 1993 main
conda 58.9 kB | noarch/r-drawr-1.0.1-r40hc72bb7e_1.tar.bz2  3 years and 9 months ago 2049 main
conda 58.9 kB | noarch/r-drawr-1.0.1-r41hc72bb7e_1.tar.bz2  3 years and 9 months ago 2068 main
conda 58.5 kB | noarch/r-drawr-1.0.1-r40h6115d3f_1.tar.bz2  4 years and 9 months ago 2865 main
conda 58.7 kB | noarch/r-drawr-1.0.1-r36h6115d3f_1.tar.bz2  4 years and 9 months ago 2850 main
conda 58.4 kB | noarch/r-drawr-1.0.1-r35h6115d3f_0.tar.bz2  4 years and 9 months ago 2892 main
conda 58.8 kB | noarch/r-drawr-1.0.1-r36h6115d3f_0.tar.bz2  4 years and 9 months ago 2889 main

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