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Efficient phylogenetic analyses on massive phylogenies comprising up to millions of tips. Functions include pruning, rerooting, calculation of most-recent common ancestors, calculating distances from the tree root and calculating pairwise distances. Calculation of phylogenetic signal and mean trait depth (trait conservatism), ancestral state reconstruction and hidden character prediction of discrete characters, simulating and fitting models of trait evolution, fitting and simulating diversification models, dating trees, comparing trees, and reading/writing trees in Newick format. Citation: Louca, Stilianos and Doebeli, Michael (2017) <doi:10.1093/bioinformatics/btx701>.

copied from cf-post-staging / r-castor
Type Size Name Uploaded Downloads Labels
conda 2.5 MB | win-64/r-castor-1.8.2-r44h8ae3a7c_1.conda  1 year and 1 month ago 285 main
conda 2.4 MB | win-64/r-castor-1.8.2-r43h8ae3a7c_1.conda  1 year and 1 month ago 302 main
conda 2.6 MB | osx-64/r-castor-1.8.2-r44h25d921d_1.conda  1 year and 1 month ago 347 main
conda 2.6 MB | osx-64/r-castor-1.8.2-r43h25d921d_1.conda  1 year and 1 month ago 325 main
conda 2.5 MB | linux-64/r-castor-1.8.2-r43h0d4f4ea_1.conda  1 year and 1 month ago 1735 main
conda 2.5 MB | linux-64/r-castor-1.8.2-r44h0d4f4ea_1.conda  1 year and 1 month ago 2056 main
conda 2.4 MB | win-64/r-castor-1.8.2-r41he75b88d_0.conda  1 year and 1 month ago 315 main
conda 2.6 MB | osx-64/r-castor-1.8.2-r42h25d921d_0.conda  1 year and 1 month ago 300 main
conda 2.6 MB | osx-64/r-castor-1.8.2-r43h25d921d_0.conda  1 year and 1 month ago 275 main
conda 2.5 MB | linux-64/r-castor-1.8.2-r43ha18555a_0.conda  1 year and 1 month ago 1547 main
conda 2.5 MB | linux-64/r-castor-1.8.2-r42ha18555a_0.conda  1 year and 1 month ago 1834 main

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