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Efficient phylogenetic analyses on massive phylogenies comprising up to millions of tips. Functions include pruning, rerooting, calculation of most-recent common ancestors, calculating distances from the tree root and calculating pairwise distances. Calculation of phylogenetic signal and mean trait depth (trait conservatism), ancestral state reconstruction and hidden character prediction of discrete characters, simulating and fitting models of trait evolution, fitting and simulating diversification models, dating trees, comparing trees, and reading/writing trees in Newick format. Citation: Louca, Stilianos and Doebeli, Michael (2017) <doi:10.1093/bioinformatics/btx701>.

copied from cf-staging / r-castor
Type Size Name Uploaded Downloads Labels
conda 1.0 MB | win-64/r-castor-1.3.5-r351h6115d3f_0.tar.bz2  6 years and 7 days ago 1528 main cf202003
conda 976.6 kB | linux-64/r-castor-1.3.5-r351h29659fb_0.tar.bz2  6 years and 7 days ago 4278 main cf202003
conda 1.0 MB | osx-64/r-castor-1.3.4-r351h9d2a408_0.tar.bz2  6 years and 2 months ago 366 main cf202003 cf201901
conda 936.5 kB | linux-64/r-castor-1.3.4-r351h9d2a408_0.tar.bz2  6 years and 2 months ago 4577 main cf202003 cf201901
conda 867.7 kB | osx-64/r-castor-1.3.4-r351h466af19_1000.tar.bz2  6 years and 2 months ago 393 main gcc7 cf202003
conda 852.3 kB | linux-64/r-castor-1.3.4-r351h29659fb_1000.tar.bz2  6 years and 2 months ago 4686 main gcc7 cf202003
conda 890.2 kB | win-64/r-castor-1.3.4-r351h6115d3f_1000.tar.bz2  6 years and 2 months ago 1623 main cf202003 cf201901
conda 867.3 kB | osx-64/r-castor-1.3.4-r341hfc679d8_0.tar.bz2  6 years and 6 months ago 585 main cf202003 cf201901
conda 710.6 kB | win-64/r-castor-1.3.4-r341hca4a3dc_0.tar.bz2  6 years and 6 months ago 1728 main cf202003 cf201901
conda 784.6 kB | linux-64/r-castor-1.3.4-r341hfc679d8_0.tar.bz2  6 years and 6 months ago 5760 main cf202003 cf201901
conda 702.5 kB | win-64/r-castor-1.3.3-r341hca4a3dc_2.tar.bz2  6 years and 7 months ago 1757 main cf202003 cf201901
conda 769.4 kB | linux-64/r-castor-1.3.3-r341hfc679d8_2.tar.bz2  6 years and 7 months ago 4746 main cf202003 cf201901
conda 852.7 kB | osx-64/r-castor-1.3.3-r341hfc679d8_2.tar.bz2  6 years and 7 months ago 357 main cf202003 cf201901
conda 852.1 kB | osx-64/r-castor-1.3.3-r341_1.tar.bz2  6 years and 8 months ago 368 main cf202003 cf201901
conda 702.0 kB | win-64/r-castor-1.3.3-r341_1.tar.bz2  6 years and 8 months ago 1806 main cf202003 cf201901
conda 753.9 kB | linux-64/r-castor-1.3.3-r341_1.tar.bz2  6 years and 8 months ago 4931 main cf202003 cf201901
conda 702.6 kB | win-64/r-castor-1.3.3-r341_0.tar.bz2  6 years and 10 months ago 62 broken
conda 852.7 kB | osx-64/r-castor-1.3.3-r341_0.tar.bz2  6 years and 10 months ago 35 broken
conda 753.8 kB | linux-64/r-castor-1.3.3-r341_0.tar.bz2  6 years and 10 months ago 166 broken

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