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Efficient phylogenetic analyses on massive phylogenies comprising up to millions of tips. Functions include pruning, rerooting, calculation of most-recent common ancestors, calculating distances from the tree root and calculating pairwise distances. Calculation of phylogenetic signal and mean trait depth (trait conservatism), ancestral state reconstruction and hidden character prediction of discrete characters, simulating and fitting models of trait evolution, fitting and simulating diversification models, dating trees, comparing trees, and reading/writing trees in Newick format. Citation: Louca, Stilianos and Doebeli, Michael (2017) <doi:10.1093/bioinformatics/btx701>.

copied from cf-staging / r-castor
Type Size Name Uploaded Downloads Labels
conda 2.4 MB | win-64/r-castor-1.7.10-r41ha856d6a_1.conda  1 year and 8 months ago 484 main
conda 2.5 MB | osx-64/r-castor-1.7.10-r43hac7d2d5_1.conda  1 year and 8 months ago 274 main
conda 2.5 MB | osx-64/r-castor-1.7.10-r42hac7d2d5_1.conda  1 year and 8 months ago 291 main
conda 2.4 MB | linux-64/r-castor-1.7.10-r42ha503ecb_1.conda  1 year and 8 months ago 1675 main
conda 2.4 MB | linux-64/r-castor-1.7.10-r43ha503ecb_1.conda  1 year and 8 months ago 1934 main
conda 2.4 MB | win-64/r-castor-1.7.10-r41ha856d6a_0.conda  1 year and 9 months ago 507 main
conda 2.5 MB | osx-64/r-castor-1.7.10-r41hac7d2d5_0.conda  1 year and 9 months ago 220 main
conda 2.5 MB | osx-64/r-castor-1.7.10-r42hac7d2d5_0.conda  1 year and 9 months ago 280 main
conda 2.4 MB | linux-64/r-castor-1.7.10-r41ha503ecb_0.conda  1 year and 9 months ago 1673 main
conda 2.4 MB | linux-64/r-castor-1.7.10-r42ha503ecb_0.conda  1 year and 9 months ago 1904 main

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