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Efficient phylogenetic analyses on massive phylogenies comprising up to millions of tips. Functions include pruning, rerooting, calculation of most-recent common ancestors, calculating distances from the tree root and calculating pairwise distances. Calculation of phylogenetic signal and mean trait depth (trait conservatism), ancestral state reconstruction and hidden character prediction of discrete characters, simulating and fitting models of trait evolution, fitting and simulating diversification models, dating trees, comparing trees, and reading/writing trees in Newick format. Citation: Louca, Stilianos and Doebeli, Michael (2017) <doi:10.1093/bioinformatics/btx701>.

copied from cf-staging / r-castor
Type Size Name Uploaded Downloads Labels
conda 2.5 MB | win-64/r-castor-1.8.2-r44h8ae3a7c_1.conda  1 year and 27 days ago 284 main
conda 2.4 MB | win-64/r-castor-1.8.2-r43h8ae3a7c_1.conda  1 year and 27 days ago 302 main
conda 2.6 MB | osx-64/r-castor-1.8.2-r44h25d921d_1.conda  1 year and 27 days ago 347 main
conda 2.6 MB | osx-64/r-castor-1.8.2-r43h25d921d_1.conda  1 year and 27 days ago 325 main
conda 2.5 MB | linux-64/r-castor-1.8.2-r43h0d4f4ea_1.conda  1 year and 27 days ago 1727 main
conda 2.5 MB | linux-64/r-castor-1.8.2-r44h0d4f4ea_1.conda  1 year and 27 days ago 2049 main
conda 2.4 MB | win-64/r-castor-1.8.2-r41he75b88d_0.conda  1 year and 1 month ago 314 main
conda 2.6 MB | osx-64/r-castor-1.8.2-r42h25d921d_0.conda  1 year and 1 month ago 299 main
conda 2.6 MB | osx-64/r-castor-1.8.2-r43h25d921d_0.conda  1 year and 1 month ago 274 main
conda 2.5 MB | linux-64/r-castor-1.8.2-r43ha18555a_0.conda  1 year and 1 month ago 1540 main
conda 2.5 MB | linux-64/r-castor-1.8.2-r42ha18555a_0.conda  1 year and 1 month ago 1824 main

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