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bioconda / packages / ucsc-estorient

Read ESTs from a database and determine orientation based on estOrientInfo table or direction in gbCdnaInfo table. Update PSLs so that the strand reflects the direction of transcription. By default, PSLs where the direction can't be determined are dropped.

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Type Size Name Uploaded Downloads Labels
conda 2.0 MB | linux-64/ucsc-estorient-469-h664eb37_1.tar.bz2  3 months and 20 days ago 51 main
conda 2.0 MB | linux-64/ucsc-estorient-469-h9b8f530_0.tar.bz2  7 months and 4 days ago 402 main
conda 188.5 kB | linux-64/ucsc-estorient-377-ha8a8165_3.tar.bz2  3 years and 2 months ago 356 main
conda 187.9 kB | linux-64/ucsc-estorient-377-h0b8a92a_2.tar.bz2  4 years and 6 days ago 215 main
conda 842.6 kB | osx-64/ucsc-estorient-377-h516baf0_1.tar.bz2  4 years and 7 months ago 94 main
conda 176.1 kB | linux-64/ucsc-estorient-377-h446ed27_1.tar.bz2  4 years and 7 months ago 192 main
conda 840.6 kB | linux-64/ucsc-estorient-377-h199ee4e_0.tar.bz2  6 years and 1 month ago 299 main
conda 789.8 kB | osx-64/ucsc-estorient-377-h8b15c51_0.tar.bz2  6 years and 1 month ago 4167 main
conda 2.5 MB | linux-64/ucsc-estorient-366-h5eb252a_0.tar.bz2  6 years and 9 months ago 488 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-366-h5eb252a_0.tar.bz2  6 years and 9 months ago 4318 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-h5eb252a_2.tar.bz2  6 years and 9 months ago 4050 main cf201901
conda 2.4 MB | linux-64/ucsc-estorient-357-1.tar.bz2  7 years and 1 month ago 513 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-1.tar.bz2  7 years and 1 month ago 313 main cf201901
conda 2.4 MB | linux-64/ucsc-estorient-357-0.tar.bz2  7 years and 4 months ago 739 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-0.tar.bz2  7 years and 4 months ago 76 main cf201901
conda 1.7 MB | osx-64/ucsc-estorient-332-0.tar.bz2  8 years and 9 months ago 8572 main cf201901
conda 1.7 MB | linux-64/ucsc-estorient-332-0.tar.bz2  8 years and 9 months ago 847 main cf201901
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