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bioconda / packages / ucsc-estorient

Read ESTs from a database and determine orientation based on estOrientInfo table or direction in gbCdnaInfo table. Update PSLs so that the strand reflects the direction of transcription. By default, PSLs where the direction can't be determined are dropped.

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Type Size Name Uploaded Downloads Labels
conda 4.7 MB | osx-64/ucsc-estorient-482-h4328a2f_0.tar.bz2  6 months and 9 days ago 51 main
conda 1.2 MB | linux-64/ucsc-estorient-482-h0b57e2e_0.tar.bz2  6 months and 9 days ago 78 main
conda 2.0 MB | linux-64/ucsc-estorient-469-h664eb37_1.tar.bz2  1 year and 27 days ago 146 main
conda 2.0 MB | linux-64/ucsc-estorient-469-h9b8f530_0.tar.bz2  1 year and 4 months ago 515 main
conda 188.5 kB | linux-64/ucsc-estorient-377-ha8a8165_3.tar.bz2  3 years and 11 months ago 419 main
conda 187.9 kB | linux-64/ucsc-estorient-377-h0b8a92a_2.tar.bz2  4 years and 9 months ago 279 main
conda 842.6 kB | osx-64/ucsc-estorient-377-h516baf0_1.tar.bz2  5 years and 4 months ago 113 main
conda 176.1 kB | linux-64/ucsc-estorient-377-h446ed27_1.tar.bz2  5 years and 5 months ago 256 main
conda 840.6 kB | linux-64/ucsc-estorient-377-h199ee4e_0.tar.bz2  6 years and 10 months ago 361 main
conda 789.8 kB | osx-64/ucsc-estorient-377-h8b15c51_0.tar.bz2  6 years and 10 months ago 4209 main
conda 2.5 MB | linux-64/ucsc-estorient-366-h5eb252a_0.tar.bz2  7 years and 6 months ago 557 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-366-h5eb252a_0.tar.bz2  7 years and 6 months ago 4360 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-h5eb252a_2.tar.bz2  7 years and 6 months ago 4093 main cf201901
conda 2.4 MB | linux-64/ucsc-estorient-357-1.tar.bz2  7 years and 11 months ago 587 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-1.tar.bz2  7 years and 11 months ago 334 main cf201901
conda 2.4 MB | linux-64/ucsc-estorient-357-0.tar.bz2  8 years and 1 month ago 814 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-0.tar.bz2  8 years and 1 month ago 95 main cf201901
conda 1.7 MB | osx-64/ucsc-estorient-332-0.tar.bz2  9 years and 7 months ago 8643 main cf201901
conda 1.7 MB | linux-64/ucsc-estorient-332-0.tar.bz2  9 years and 7 months ago 918 main cf201901
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