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bioconda / packages / ucsc-estorient

Read ESTs from a database and determine orientation based on estOrientInfo table or direction in gbCdnaInfo table. Update PSLs so that the strand reflects the direction of transcription. By default, PSLs where the direction can't be determined are dropped.

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Type Size Name Uploaded Downloads Labels
conda 4.7 MB | osx-64/ucsc-estorient-482-h4328a2f_0.tar.bz2  10 months and 17 days ago 65 main
conda 1.2 MB | linux-64/ucsc-estorient-482-h0b57e2e_0.tar.bz2  10 months and 17 days ago 110 main
conda 2.0 MB | linux-64/ucsc-estorient-469-h664eb37_1.tar.bz2  1 year and 5 months ago 177 main
conda 2.0 MB | linux-64/ucsc-estorient-469-h9b8f530_0.tar.bz2  1 year and 8 months ago 547 main
conda 188.5 kB | linux-64/ucsc-estorient-377-ha8a8165_3.tar.bz2  4 years and 4 months ago 443 main
conda 187.9 kB | linux-64/ucsc-estorient-377-h0b8a92a_2.tar.bz2  5 years and 1 month ago 304 main
conda 842.6 kB | osx-64/ucsc-estorient-377-h516baf0_1.tar.bz2  5 years and 9 months ago 120 main
conda 176.1 kB | linux-64/ucsc-estorient-377-h446ed27_1.tar.bz2  5 years and 9 months ago 280 main
conda 840.6 kB | linux-64/ucsc-estorient-377-h199ee4e_0.tar.bz2  7 years and 2 months ago 386 main
conda 789.8 kB | osx-64/ucsc-estorient-377-h8b15c51_0.tar.bz2  7 years and 2 months ago 4216 main
conda 2.5 MB | linux-64/ucsc-estorient-366-h5eb252a_0.tar.bz2  7 years and 10 months ago 581 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-366-h5eb252a_0.tar.bz2  7 years and 10 months ago 4367 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-h5eb252a_2.tar.bz2  7 years and 10 months ago 4101 main cf201901
conda 2.4 MB | linux-64/ucsc-estorient-357-1.tar.bz2  8 years and 3 months ago 612 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-1.tar.bz2  8 years and 3 months ago 342 main cf201901
conda 2.4 MB | linux-64/ucsc-estorient-357-0.tar.bz2  8 years and 5 months ago 840 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-0.tar.bz2  8 years and 5 months ago 102 main cf201901
conda 1.7 MB | osx-64/ucsc-estorient-332-0.tar.bz2  9 years and 11 months ago 8651 main cf201901
conda 1.7 MB | linux-64/ucsc-estorient-332-0.tar.bz2  9 years and 11 months ago 945 main cf201901
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