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bioconda / packages / ucsc-estorient

Read ESTs from a database and determine orientation based on estOrientInfo table or direction in gbCdnaInfo table. Update PSLs so that the strand reflects the direction of transcription. By default, PSLs where the direction can't be determined are dropped.

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Type Size Name Uploaded Downloads Labels
conda 4.7 MB | osx-64/ucsc-estorient-482-h4328a2f_0.tar.bz2  6 months and 27 days ago 54 main
conda 1.2 MB | linux-64/ucsc-estorient-482-h0b57e2e_0.tar.bz2  6 months and 28 days ago 82 main
conda 2.0 MB | linux-64/ucsc-estorient-469-h664eb37_1.tar.bz2  1 year and 1 month ago 151 main
conda 2.0 MB | linux-64/ucsc-estorient-469-h9b8f530_0.tar.bz2  1 year and 4 months ago 520 main
conda 188.5 kB | linux-64/ucsc-estorient-377-ha8a8165_3.tar.bz2  4 years and 10 days ago 424 main
conda 187.9 kB | linux-64/ucsc-estorient-377-h0b8a92a_2.tar.bz2  4 years and 10 months ago 284 main
conda 842.6 kB | osx-64/ucsc-estorient-377-h516baf0_1.tar.bz2  5 years and 5 months ago 115 main
conda 176.1 kB | linux-64/ucsc-estorient-377-h446ed27_1.tar.bz2  5 years and 5 months ago 261 main
conda 840.6 kB | linux-64/ucsc-estorient-377-h199ee4e_0.tar.bz2  6 years and 11 months ago 366 main
conda 789.8 kB | osx-64/ucsc-estorient-377-h8b15c51_0.tar.bz2  6 years and 11 months ago 4211 main
conda 2.5 MB | linux-64/ucsc-estorient-366-h5eb252a_0.tar.bz2  7 years and 7 months ago 561 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-366-h5eb252a_0.tar.bz2  7 years and 7 months ago 4361 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-h5eb252a_2.tar.bz2  7 years and 7 months ago 4094 main cf201901
conda 2.4 MB | linux-64/ucsc-estorient-357-1.tar.bz2  7 years and 11 months ago 592 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-1.tar.bz2  7 years and 11 months ago 335 main cf201901
conda 2.4 MB | linux-64/ucsc-estorient-357-0.tar.bz2  8 years and 2 months ago 819 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-0.tar.bz2  8 years and 2 months ago 96 main cf201901
conda 1.7 MB | osx-64/ucsc-estorient-332-0.tar.bz2  9 years and 7 months ago 8645 main cf201901
conda 1.7 MB | linux-64/ucsc-estorient-332-0.tar.bz2  9 years and 7 months ago 923 main cf201901
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