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bioconda / packages / ucsc-estorient

Read ESTs from a database and determine orientation based on estOrientInfo table or direction in gbCdnaInfo table. Update PSLs so that the strand reflects the direction of transcription. By default, PSLs where the direction can't be determined are dropped.

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Type Size Name Uploaded Downloads Labels
conda 4.7 MB | osx-64/ucsc-estorient-482-h4328a2f_0.tar.bz2  9 months and 27 days ago 64 main
conda 1.2 MB | linux-64/ucsc-estorient-482-h0b57e2e_0.tar.bz2  9 months and 28 days ago 107 main
conda 2.0 MB | linux-64/ucsc-estorient-469-h664eb37_1.tar.bz2  1 year and 4 months ago 174 main
conda 2.0 MB | linux-64/ucsc-estorient-469-h9b8f530_0.tar.bz2  1 year and 7 months ago 544 main
conda 188.5 kB | linux-64/ucsc-estorient-377-ha8a8165_3.tar.bz2  4 years and 3 months ago 440 main
conda 187.9 kB | linux-64/ucsc-estorient-377-h0b8a92a_2.tar.bz2  5 years and 1 month ago 301 main
conda 842.6 kB | osx-64/ucsc-estorient-377-h516baf0_1.tar.bz2  5 years and 8 months ago 119 main
conda 176.1 kB | linux-64/ucsc-estorient-377-h446ed27_1.tar.bz2  5 years and 8 months ago 277 main
conda 840.6 kB | linux-64/ucsc-estorient-377-h199ee4e_0.tar.bz2  7 years and 2 months ago 383 main
conda 789.8 kB | osx-64/ucsc-estorient-377-h8b15c51_0.tar.bz2  7 years and 2 months ago 4215 main
conda 2.5 MB | linux-64/ucsc-estorient-366-h5eb252a_0.tar.bz2  7 years and 10 months ago 578 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-366-h5eb252a_0.tar.bz2  7 years and 10 months ago 4366 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-h5eb252a_2.tar.bz2  7 years and 10 months ago 4099 main cf201901
conda 2.4 MB | linux-64/ucsc-estorient-357-1.tar.bz2  8 years and 2 months ago 609 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-1.tar.bz2  8 years and 2 months ago 340 main cf201901
conda 2.4 MB | linux-64/ucsc-estorient-357-0.tar.bz2  8 years and 5 months ago 837 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-0.tar.bz2  8 years and 5 months ago 101 main cf201901
conda 1.7 MB | osx-64/ucsc-estorient-332-0.tar.bz2  9 years and 10 months ago 8649 main cf201901
conda 1.7 MB | linux-64/ucsc-estorient-332-0.tar.bz2  9 years and 10 months ago 941 main cf201901
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