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bioconda / packages / splicemap

Detects splice junctions from RNA-seq data. This method does not depend on any existing annotation of gene structures and is capable of finding novel splice junctions with high sensitivity and specificity. It can handle long reads (50–100 nt) and can exploit paired-read information to improve mapping accuracy.

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Type Size Name Uploaded Downloads Labels
conda 463.4 kB | osx-64/splicemap-3.3.5.2-h5fa12a8_6.tar.bz2  1 month and 17 days ago 11 main
conda 444.6 kB | linux-64/splicemap-3.3.5.2-h9948957_6.tar.bz2  1 month and 17 days ago 30 main
conda 458.1 kB | osx-64/splicemap-3.3.5.2-h85dcccf_5.tar.bz2  1 year and 8 months ago 41 main
conda 440.1 kB | linux-64/splicemap-3.3.5.2-h4ac6f70_5.tar.bz2  1 year and 8 months ago 96 main
conda 408.7 kB | linux-64/splicemap-3.3.5.2-h9f5acd7_4.tar.bz2  2 years and 11 months ago 139 main
conda 406.8 kB | osx-64/splicemap-3.3.5.2-hcd10b59_4.tar.bz2  2 years and 11 months ago 1992 main
conda 397.0 kB | linux-64/splicemap-3.3.5.2-h7d875b9_3.tar.bz2  3 years and 10 months ago 162 main
conda 404.2 kB | osx-64/splicemap-3.3.5.2-hb280591_3.tar.bz2  3 years and 10 months ago 675 main
conda 415.0 kB | osx-64/splicemap-3.3.5.2-ha1b3eb9_2.tar.bz2  4 years and 6 months ago 523 main
conda 416.9 kB | linux-64/splicemap-3.3.5.2-hc9558a2_2.tar.bz2  4 years and 6 months ago 169 main
conda 424.2 kB | linux-64/splicemap-3.3.5.2-1.tar.bz2  6 years and 7 months ago 358 main cf201901
conda 419.4 kB | osx-64/splicemap-3.3.5.2-1.tar.bz2  6 years and 7 months ago 941 main cf201901
conda 419.1 kB | osx-64/splicemap-3.3.5.2-0.tar.bz2  6 years and 7 months ago 289 main cf201901
conda 428.9 kB | linux-64/splicemap-3.3.5.2-0.tar.bz2  6 years and 7 months ago 340 main cf201901
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