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bioconda / packages / splicemap

Detects splice junctions from RNA-seq data. This method does not depend on any existing annotation of gene structures and is capable of finding novel splice junctions with high sensitivity and specificity. It can handle long reads (50–100 nt) and can exploit paired-read information to improve mapping accuracy.

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Type Size Name Uploaded Downloads Labels
conda 463.4 kB | osx-64/splicemap-3.3.5.2-h5fa12a8_6.tar.bz2  4 months and 7 days ago 26 main
conda 444.6 kB | linux-64/splicemap-3.3.5.2-h9948957_6.tar.bz2  4 months and 7 days ago 58 main
conda 458.1 kB | osx-64/splicemap-3.3.5.2-h85dcccf_5.tar.bz2  1 year and 11 months ago 47 main
conda 440.1 kB | linux-64/splicemap-3.3.5.2-h4ac6f70_5.tar.bz2  1 year and 11 months ago 116 main
conda 408.7 kB | linux-64/splicemap-3.3.5.2-h9f5acd7_4.tar.bz2  3 years and 1 month ago 160 main
conda 406.8 kB | osx-64/splicemap-3.3.5.2-hcd10b59_4.tar.bz2  3 years and 1 month ago 2111 main
conda 397.0 kB | linux-64/splicemap-3.3.5.2-h7d875b9_3.tar.bz2  4 years and 24 days ago 182 main
conda 404.2 kB | osx-64/splicemap-3.3.5.2-hb280591_3.tar.bz2  4 years and 28 days ago 683 main
conda 415.0 kB | osx-64/splicemap-3.3.5.2-ha1b3eb9_2.tar.bz2  4 years and 9 months ago 532 main
conda 416.9 kB | linux-64/splicemap-3.3.5.2-hc9558a2_2.tar.bz2  4 years and 9 months ago 188 main
conda 424.2 kB | linux-64/splicemap-3.3.5.2-1.tar.bz2  6 years and 10 months ago 382 main cf201901
conda 419.4 kB | osx-64/splicemap-3.3.5.2-1.tar.bz2  6 years and 10 months ago 948 main cf201901
conda 419.1 kB | osx-64/splicemap-3.3.5.2-0.tar.bz2  6 years and 10 months ago 296 main cf201901
conda 428.9 kB | linux-64/splicemap-3.3.5.2-0.tar.bz2  6 years and 10 months ago 363 main cf201901
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