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Simka and simkaMin are de novo comparative metagenomics tools. Simka represents each dataset as a k-mer spectrum and computes several classical ecological distances between them. SimkaMin outputs approximate (but very similar) results by subsampling the kmer space and requires much less computational resources.

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Type	Size	Name	Uploaded	Downloads	Labels
conda	10.4 MB	\| linux-64/simka-1.5.3-h077b44d_5.tar.bz2	1 year and 4 months ago	268	main
conda	10.4 MB	\| linux-64/simka-1.5.3-hdcf5f25_4.tar.bz2	2 years and 11 months ago	330	main
conda	8.9 MB	\| osx-64/simka-1.5.3-hdf58011_4.tar.bz2	2 years and 11 months ago	1415	main
conda	10.4 MB	\| linux-64/simka-1.5.3-hdcf5f25_3.tar.bz2	2 years and 11 months ago	188	main
conda	10.2 MB	\| linux-64/simka-1.5.3-hd03093a_3.tar.bz2	2 years and 11 months ago	190	main
conda	9.0 MB	\| osx-64/simka-1.5.3-h66d0458_3.tar.bz2	2 years and 11 months ago	61	main
conda	8.8 MB	\| osx-64/simka-1.5.3-h6151dfb_2.tar.bz2	4 years and 2 months ago	74	main
conda	10.1 MB	\| linux-64/simka-1.5.3-hd03093a_2.tar.bz2	4 years and 2 months ago	322	main
conda	8.6 MB	\| osx-64/simka-1.5.3-h87af4ef_1.tar.bz2	5 years and 29 days ago	1500	main
conda	10.2 MB	\| linux-64/simka-1.5.3-h9a82719_1.tar.bz2	5 years and 30 days ago	376	main
conda	8.7 MB	\| osx-64/simka-1.5.3-h7475705_0.tar.bz2	5 years and 3 months ago	239	main
conda	9.9 MB	\| linux-64/simka-1.5.3-he513fc3_0.tar.bz2	5 years and 3 months ago	328	main

bioconda / packages / simka 0

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bioconda / packages / simka

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