Simka and simkaMin are de novo comparative metagenomics tools. Simka represents each dataset as a k-mer spectrum and computes several classical ecological distances between them. SimkaMin outputs approximate (but very similar) results by subsampling the kmer space and requires much less computational resources.
| Label | Latest Version |
|---|---|
| main | 1.5.3 |
| cf201901 | 1.4.0 |
