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RNAstructure is a complete package for RNA and DNA secondary structure prediction and analysis. It includes algorithms for secondary structure prediction, including facility to predict base pairing probabilities. It also can be used to predict bimolecular structures and can predict the equilibrium binding affinity of an oligonucleotide to a structured RNA target. This is useful for siRNA design. It can also predict secondary structures common to two, unaligned sequences, which is much more accurate than single sequence secondary structure prediction. Finally, RNAstructure can take a number of different types of experiment mapping data to constrain or restrain structure prediction. These include chemical mapping, enzymatic mapping, NMR, and SHAPE data.

Type Size Name Uploaded Downloads Labels
conda 312.0 MB | linux-64/rnastructure-6.4-h503566f_2.tar.bz2  2 months and 4 days ago 202 main
conda 39.7 MB | osx-64/rnastructure-6.4-h6ed3961_2.tar.bz2  2 months and 4 days ago 57 main
conda 36.1 MB | osx-arm64/rnastructure-6.4-h39b84e0_2.tar.bz2  2 months and 4 days ago 31 main
conda 338.1 MB | linux-aarch64/rnastructure-6.4-h80f0ee0_2.tar.bz2  2 months and 4 days ago 43 main
conda 312.0 MB | linux-64/rnastructure-6.4-h503566f_1.tar.bz2  3 months and 14 days ago 134 main
conda 39.7 MB | osx-64/rnastructure-6.4-h6ed3961_1.tar.bz2  3 months and 15 days ago 55 main
conda 41.0 MB | osx-64/rnastructure-6.4-h275c879_0.tar.bz2  1 year and 1 month ago 449 main
conda 314.0 MB | linux-64/rnastructure-6.4-hdbdd923_0.tar.bz2  1 year and 1 month ago 653 main
conda 40.4 MB | osx-64/rnastructure-6.3-h275c879_3.tar.bz2  1 year and 10 months ago 110 main
conda 314.8 MB | linux-64/rnastructure-6.3-hdbdd923_3.tar.bz2  1 year and 10 months ago 650 main
conda 314.6 MB | linux-64/rnastructure-6.3-hdbdd923_2.tar.bz2  1 year and 10 months ago 119 main
conda 307.3 MB | linux-64/rnastructure-6.3-h87f3376_2.tar.bz2  1 year and 10 months ago 124 main
conda 40.6 MB | osx-64/rnastructure-6.3-h782615f_2.tar.bz2  1 year and 10 months ago 979 main
conda 307.2 MB | linux-64/rnastructure-6.3-h87f3376_1.tar.bz2  3 years and 1 month ago 2548 main
conda 38.6 MB | osx-64/rnastructure-6.3-h61da179_1.tar.bz2  3 years and 1 month ago 2126 main
conda 37.8 MB | osx-64/rnastructure-6.3-h589c0e0_0.tar.bz2  3 years and 7 months ago 1684 main
conda 321.6 MB | linux-64/rnastructure-6.3-h1b792b2_0.tar.bz2  3 years and 7 months ago 1497 main
conda 26.8 MB | linux-64/rnastructure-6.1-h1b792b2_2.tar.bz2  4 years and 3 days ago 1559 main
conda 26.3 MB | linux-64/rnastructure-6.1-he1b5a44_1.tar.bz2  4 years and 8 months ago 1734 main
conda 27.4 MB | linux-64/rnastructure-6.1-hfc679d8_0.tar.bz2  6 years and 5 months ago 5942 main cf201901
conda 26.8 MB | linux-64/rnastructure-6.0-hfc679d8_1.tar.bz2  6 years and 8 months ago 4103 main cf201901
conda 15.8 MB | linux-64/rnastructure-5.7-h2d50403_2.tar.bz2  6 years and 8 months ago 4338 main cf201901
conda 26.9 MB | linux-64/rnastructure-6.0-0.tar.bz2  7 years and 5 months ago 1098 main cf201901
conda 15.8 MB | linux-64/rnastructure-5.7-1.tar.bz2  8 years and 10 months ago 1112 main cf201901
conda 59.0 MB | linux-64/rnastructure-5.7-0.tar.bz2  9 years and 2 months ago 1375 main cf201901

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