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RNAstructure is a complete package for RNA and DNA secondary structure prediction and analysis. It includes algorithms for secondary structure prediction, including facility to predict base pairing probabilities. It also can be used to predict bimolecular structures and can predict the equilibrium binding affinity of an oligonucleotide to a structured RNA target. This is useful for siRNA design. It can also predict secondary structures common to two, unaligned sequences, which is much more accurate than single sequence secondary structure prediction. Finally, RNAstructure can take a number of different types of experiment mapping data to constrain or restrain structure prediction. These include chemical mapping, enzymatic mapping, NMR, and SHAPE data.

Type Size Name Uploaded Downloads Labels
conda 312.0 MB | linux-64/rnastructure-6.4-h503566f_2.tar.bz2  1 month and 25 days ago 183 main
conda 39.7 MB | osx-64/rnastructure-6.4-h6ed3961_2.tar.bz2  1 month and 25 days ago 51 main
conda 36.1 MB | osx-arm64/rnastructure-6.4-h39b84e0_2.tar.bz2  1 month and 25 days ago 29 main
conda 338.1 MB | linux-aarch64/rnastructure-6.4-h80f0ee0_2.tar.bz2  1 month and 25 days ago 36 main
conda 312.0 MB | linux-64/rnastructure-6.4-h503566f_1.tar.bz2  3 months and 7 days ago 132 main
conda 39.7 MB | osx-64/rnastructure-6.4-h6ed3961_1.tar.bz2  3 months and 8 days ago 55 main
conda 41.0 MB | osx-64/rnastructure-6.4-h275c879_0.tar.bz2  1 year and 1 month ago 449 main
conda 314.0 MB | linux-64/rnastructure-6.4-hdbdd923_0.tar.bz2  1 year and 1 month ago 650 main
conda 40.4 MB | osx-64/rnastructure-6.3-h275c879_3.tar.bz2  1 year and 10 months ago 110 main
conda 314.8 MB | linux-64/rnastructure-6.3-hdbdd923_3.tar.bz2  1 year and 10 months ago 648 main
conda 314.6 MB | linux-64/rnastructure-6.3-hdbdd923_2.tar.bz2  1 year and 10 months ago 117 main
conda 307.3 MB | linux-64/rnastructure-6.3-h87f3376_2.tar.bz2  1 year and 10 months ago 122 main
conda 40.6 MB | osx-64/rnastructure-6.3-h782615f_2.tar.bz2  1 year and 10 months ago 976 main
conda 307.2 MB | linux-64/rnastructure-6.3-h87f3376_1.tar.bz2  3 years and 25 days ago 2306 main
conda 38.6 MB | osx-64/rnastructure-6.3-h61da179_1.tar.bz2  3 years and 27 days ago 1904 main
conda 37.8 MB | osx-64/rnastructure-6.3-h589c0e0_0.tar.bz2  3 years and 7 months ago 1447 main
conda 321.6 MB | linux-64/rnastructure-6.3-h1b792b2_0.tar.bz2  3 years and 7 months ago 1264 main
conda 26.8 MB | linux-64/rnastructure-6.1-h1b792b2_2.tar.bz2  3 years and 11 months ago 1346 main
conda 26.3 MB | linux-64/rnastructure-6.1-he1b5a44_1.tar.bz2  4 years and 8 months ago 1496 main
conda 27.4 MB | linux-64/rnastructure-6.1-hfc679d8_0.tar.bz2  6 years and 5 months ago 5725 main cf201901
conda 26.8 MB | linux-64/rnastructure-6.0-hfc679d8_1.tar.bz2  6 years and 8 months ago 4098 main cf201901
conda 15.8 MB | linux-64/rnastructure-5.7-h2d50403_2.tar.bz2  6 years and 8 months ago 4333 main cf201901
conda 26.9 MB | linux-64/rnastructure-6.0-0.tar.bz2  7 years and 5 months ago 1096 main cf201901
conda 15.8 MB | linux-64/rnastructure-5.7-1.tar.bz2  8 years and 10 months ago 1110 main cf201901
conda 59.0 MB | linux-64/rnastructure-5.7-0.tar.bz2  9 years and 2 months ago 1373 main cf201901

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