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RNAstructure is a complete package for RNA and DNA secondary structure prediction and analysis. It includes algorithms for secondary structure prediction, including facility to predict base pairing probabilities. It also can be used to predict bimolecular structures and can predict the equilibrium binding affinity of an oligonucleotide to a structured RNA target. This is useful for siRNA design. It can also predict secondary structures common to two, unaligned sequences, which is much more accurate than single sequence secondary structure prediction. Finally, RNAstructure can take a number of different types of experiment mapping data to constrain or restrain structure prediction. These include chemical mapping, enzymatic mapping, NMR, and SHAPE data.

Type Size Name Uploaded Downloads Labels
conda 312.0 MB | linux-64/rnastructure-6.4-h503566f_2.tar.bz2  4 months and 9 days ago 304 main
conda 39.7 MB | osx-64/rnastructure-6.4-h6ed3961_2.tar.bz2  4 months and 9 days ago 89 main
conda 36.1 MB | osx-arm64/rnastructure-6.4-h39b84e0_2.tar.bz2  4 months and 9 days ago 44 main
conda 338.1 MB | linux-aarch64/rnastructure-6.4-h80f0ee0_2.tar.bz2  4 months and 9 days ago 59 main
conda 312.0 MB | linux-64/rnastructure-6.4-h503566f_1.tar.bz2  5 months and 18 days ago 160 main
conda 39.7 MB | osx-64/rnastructure-6.4-h6ed3961_1.tar.bz2  5 months and 19 days ago 70 main
conda 41.0 MB | osx-64/rnastructure-6.4-h275c879_0.tar.bz2  1 year and 3 months ago 455 main
conda 314.0 MB | linux-64/rnastructure-6.4-hdbdd923_0.tar.bz2  1 year and 3 months ago 672 main
conda 40.4 MB | osx-64/rnastructure-6.3-h275c879_3.tar.bz2  2 years and 16 days ago 115 main
conda 314.8 MB | linux-64/rnastructure-6.3-hdbdd923_3.tar.bz2  2 years and 16 days ago 675 main
conda 314.6 MB | linux-64/rnastructure-6.3-hdbdd923_2.tar.bz2  2 years and 18 days ago 138 main
conda 307.3 MB | linux-64/rnastructure-6.3-h87f3376_2.tar.bz2  2 years and 20 days ago 142 main
conda 40.6 MB | osx-64/rnastructure-6.3-h782615f_2.tar.bz2  2 years and 21 days ago 996 main
conda 307.2 MB | linux-64/rnastructure-6.3-h87f3376_1.tar.bz2  3 years and 3 months ago 4706 main
conda 38.6 MB | osx-64/rnastructure-6.3-h61da179_1.tar.bz2  3 years and 3 months ago 4189 main
conda 37.8 MB | osx-64/rnastructure-6.3-h589c0e0_0.tar.bz2  3 years and 9 months ago 3791 main
conda 321.6 MB | linux-64/rnastructure-6.3-h1b792b2_0.tar.bz2  3 years and 9 months ago 3616 main
conda 26.8 MB | linux-64/rnastructure-6.1-h1b792b2_2.tar.bz2  4 years and 2 months ago 3535 main
conda 26.3 MB | linux-64/rnastructure-6.1-he1b5a44_1.tar.bz2  4 years and 10 months ago 3862 main
conda 27.4 MB | linux-64/rnastructure-6.1-hfc679d8_0.tar.bz2  6 years and 7 months ago 7859 main cf201901
conda 26.8 MB | linux-64/rnastructure-6.0-hfc679d8_1.tar.bz2  6 years and 11 months ago 4138 main cf201901
conda 15.8 MB | linux-64/rnastructure-5.7-h2d50403_2.tar.bz2  6 years and 11 months ago 4368 main cf201901
conda 26.9 MB | linux-64/rnastructure-6.0-0.tar.bz2  7 years and 7 months ago 1121 main cf201901
conda 15.8 MB | linux-64/rnastructure-5.7-1.tar.bz2  9 years and 29 days ago 1137 main cf201901
conda 59.0 MB | linux-64/rnastructure-5.7-0.tar.bz2  9 years and 4 months ago 1399 main cf201901

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