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RNAstructure is a complete package for RNA and DNA secondary structure prediction and analysis. It includes algorithms for secondary structure prediction, including facility to predict base pairing probabilities. It also can be used to predict bimolecular structures and can predict the equilibrium binding affinity of an oligonucleotide to a structured RNA target. This is useful for siRNA design. It can also predict secondary structures common to two, unaligned sequences, which is much more accurate than single sequence secondary structure prediction. Finally, RNAstructure can take a number of different types of experiment mapping data to constrain or restrain structure prediction. These include chemical mapping, enzymatic mapping, NMR, and SHAPE data.

Type Size Name Uploaded Downloads Labels
conda 41.0 MB | osx-64/rnastructure-6.4-h275c879_0.tar.bz2  9 months and 18 days ago 423 main
conda 314.0 MB | linux-64/rnastructure-6.4-hdbdd923_0.tar.bz2  9 months and 18 days ago 587 main
conda 40.4 MB | osx-64/rnastructure-6.3-h275c879_3.tar.bz2  1 year and 6 months ago 102 main
conda 314.8 MB | linux-64/rnastructure-6.3-hdbdd923_3.tar.bz2  1 year and 6 months ago 619 main
conda 314.6 MB | linux-64/rnastructure-6.3-hdbdd923_2.tar.bz2  1 year and 6 months ago 91 main
conda 307.3 MB | linux-64/rnastructure-6.3-h87f3376_2.tar.bz2  1 year and 6 months ago 93 main
conda 40.6 MB | osx-64/rnastructure-6.3-h782615f_2.tar.bz2  1 year and 6 months ago 903 main
conda 307.2 MB | linux-64/rnastructure-6.3-h87f3376_1.tar.bz2  2 years and 8 months ago 1190 main
conda 38.6 MB | osx-64/rnastructure-6.3-h61da179_1.tar.bz2  2 years and 8 months ago 887 main
conda 37.8 MB | osx-64/rnastructure-6.3-h589c0e0_0.tar.bz2  3 years and 3 months ago 430 main
conda 321.6 MB | linux-64/rnastructure-6.3-h1b792b2_0.tar.bz2  3 years and 3 months ago 296 main
conda 26.8 MB | linux-64/rnastructure-6.1-h1b792b2_2.tar.bz2  3 years and 7 months ago 333 main
conda 26.3 MB | linux-64/rnastructure-6.1-he1b5a44_1.tar.bz2  4 years and 4 months ago 481 main
conda 27.4 MB | linux-64/rnastructure-6.1-hfc679d8_0.tar.bz2  6 years and 1 month ago 4697 main cf201901
conda 26.8 MB | linux-64/rnastructure-6.0-hfc679d8_1.tar.bz2  6 years and 4 months ago 4004 main cf201901
conda 15.8 MB | linux-64/rnastructure-5.7-h2d50403_2.tar.bz2  6 years and 4 months ago 4246 main cf201901
conda 26.9 MB | linux-64/rnastructure-6.0-0.tar.bz2  7 years and 1 month ago 1067 main cf201901
conda 15.8 MB | linux-64/rnastructure-5.7-1.tar.bz2  8 years and 6 months ago 1080 main cf201901
conda 59.0 MB | linux-64/rnastructure-5.7-0.tar.bz2  8 years and 10 months ago 1341 main cf201901

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