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RNAstructure is a complete package for RNA and DNA secondary structure prediction and analysis. It includes algorithms for secondary structure prediction, including facility to predict base pairing probabilities. It also can be used to predict bimolecular structures and can predict the equilibrium binding affinity of an oligonucleotide to a structured RNA target. This is useful for siRNA design. It can also predict secondary structures common to two, unaligned sequences, which is much more accurate than single sequence secondary structure prediction. Finally, RNAstructure can take a number of different types of experiment mapping data to constrain or restrain structure prediction. These include chemical mapping, enzymatic mapping, NMR, and SHAPE data.

Type Size Name Uploaded Downloads Labels
conda 41.0 MB | osx-64/rnastructure-6.4-h275c879_0.tar.bz2  9 months and 11 days ago 414 main
conda 314.0 MB | linux-64/rnastructure-6.4-hdbdd923_0.tar.bz2  9 months and 11 days ago 580 main
conda 40.4 MB | osx-64/rnastructure-6.3-h275c879_3.tar.bz2  1 year and 5 months ago 101 main
conda 314.8 MB | linux-64/rnastructure-6.3-hdbdd923_3.tar.bz2  1 year and 5 months ago 616 main
conda 314.6 MB | linux-64/rnastructure-6.3-hdbdd923_2.tar.bz2  1 year and 5 months ago 89 main
conda 307.3 MB | linux-64/rnastructure-6.3-h87f3376_2.tar.bz2  1 year and 6 months ago 92 main
conda 40.6 MB | osx-64/rnastructure-6.3-h782615f_2.tar.bz2  1 year and 6 months ago 896 main
conda 307.2 MB | linux-64/rnastructure-6.3-h87f3376_1.tar.bz2  2 years and 8 months ago 1187 main
conda 38.6 MB | osx-64/rnastructure-6.3-h61da179_1.tar.bz2  2 years and 8 months ago 887 main
conda 37.8 MB | osx-64/rnastructure-6.3-h589c0e0_0.tar.bz2  3 years and 3 months ago 429 main
conda 321.6 MB | linux-64/rnastructure-6.3-h1b792b2_0.tar.bz2  3 years and 3 months ago 294 main
conda 26.8 MB | linux-64/rnastructure-6.1-h1b792b2_2.tar.bz2  3 years and 7 months ago 331 main
conda 26.3 MB | linux-64/rnastructure-6.1-he1b5a44_1.tar.bz2  4 years and 4 months ago 479 main
conda 27.4 MB | linux-64/rnastructure-6.1-hfc679d8_0.tar.bz2  6 years and 26 days ago 4688 main cf201901
conda 26.8 MB | linux-64/rnastructure-6.0-hfc679d8_1.tar.bz2  6 years and 4 months ago 3994 main cf201901
conda 15.8 MB | linux-64/rnastructure-5.7-h2d50403_2.tar.bz2  6 years and 4 months ago 4238 main cf201901
conda 26.9 MB | linux-64/rnastructure-6.0-0.tar.bz2  7 years and 24 days ago 1065 main cf201901
conda 15.8 MB | linux-64/rnastructure-5.7-1.tar.bz2  8 years and 6 months ago 1078 main cf201901
conda 59.0 MB | linux-64/rnastructure-5.7-0.tar.bz2  8 years and 10 months ago 1339 main cf201901

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