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RNAstructure is a complete package for RNA and DNA secondary structure prediction and analysis. It includes algorithms for secondary structure prediction, including facility to predict base pairing probabilities. It also can be used to predict bimolecular structures and can predict the equilibrium binding affinity of an oligonucleotide to a structured RNA target. This is useful for siRNA design. It can also predict secondary structures common to two, unaligned sequences, which is much more accurate than single sequence secondary structure prediction. Finally, RNAstructure can take a number of different types of experiment mapping data to constrain or restrain structure prediction. These include chemical mapping, enzymatic mapping, NMR, and SHAPE data.

Type Size Name Uploaded Downloads Labels
conda 312.0 MB | linux-64/rnastructure-6.4-h503566f_2.tar.bz2  4 months and 30 days ago 334 main
conda 39.7 MB | osx-64/rnastructure-6.4-h6ed3961_2.tar.bz2  4 months and 30 days ago 94 main
conda 36.1 MB | osx-arm64/rnastructure-6.4-h39b84e0_2.tar.bz2  4 months and 30 days ago 52 main
conda 338.1 MB | linux-aarch64/rnastructure-6.4-h80f0ee0_2.tar.bz2  4 months and 30 days ago 60 main
conda 312.0 MB | linux-64/rnastructure-6.4-h503566f_1.tar.bz2  6 months and 9 days ago 164 main
conda 39.7 MB | osx-64/rnastructure-6.4-h6ed3961_1.tar.bz2  6 months and 9 days ago 70 main
conda 41.0 MB | osx-64/rnastructure-6.4-h275c879_0.tar.bz2  1 year and 4 months ago 455 main
conda 314.0 MB | linux-64/rnastructure-6.4-hdbdd923_0.tar.bz2  1 year and 4 months ago 679 main
conda 40.4 MB | osx-64/rnastructure-6.3-h275c879_3.tar.bz2  2 years and 1 month ago 115 main
conda 314.8 MB | linux-64/rnastructure-6.3-hdbdd923_3.tar.bz2  2 years and 1 month ago 680 main
conda 314.6 MB | linux-64/rnastructure-6.3-hdbdd923_2.tar.bz2  2 years and 1 month ago 143 main
conda 307.3 MB | linux-64/rnastructure-6.3-h87f3376_2.tar.bz2  2 years and 1 month ago 148 main
conda 40.6 MB | osx-64/rnastructure-6.3-h782615f_2.tar.bz2  2 years and 1 month ago 998 main
conda 307.2 MB | linux-64/rnastructure-6.3-h87f3376_1.tar.bz2  3 years and 3 months ago 5358 main
conda 38.6 MB | osx-64/rnastructure-6.3-h61da179_1.tar.bz2  3 years and 4 months ago 4853 main
conda 37.8 MB | osx-64/rnastructure-6.3-h589c0e0_0.tar.bz2  3 years and 10 months ago 4443 main
conda 321.6 MB | linux-64/rnastructure-6.3-h1b792b2_0.tar.bz2  3 years and 10 months ago 4273 main
conda 26.8 MB | linux-64/rnastructure-6.1-h1b792b2_2.tar.bz2  4 years and 2 months ago 4185 main
conda 26.3 MB | linux-64/rnastructure-6.1-he1b5a44_1.tar.bz2  4 years and 11 months ago 4509 main
conda 27.4 MB | linux-64/rnastructure-6.1-hfc679d8_0.tar.bz2  6 years and 8 months ago 8485 main cf201901
conda 26.8 MB | linux-64/rnastructure-6.0-hfc679d8_1.tar.bz2  6 years and 11 months ago 4145 main cf201901
conda 15.8 MB | linux-64/rnastructure-5.7-h2d50403_2.tar.bz2  6 years and 11 months ago 4374 main cf201901
conda 26.9 MB | linux-64/rnastructure-6.0-0.tar.bz2  7 years and 8 months ago 1127 main cf201901
conda 15.8 MB | linux-64/rnastructure-5.7-1.tar.bz2  9 years and 1 month ago 1143 main cf201901
conda 59.0 MB | linux-64/rnastructure-5.7-0.tar.bz2  9 years and 5 months ago 1406 main cf201901

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