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bioconductor-rtopper
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public |
This package is designed to perform Gene Set Analysis across multiple genomic platforms
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2024-12-19 |
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bamread
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public |
Read bam files quickly into dataframes in Python
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2024-12-19 |
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bioconductor-hyperdraw
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public |
Visualizing Hypergaphs
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2024-12-19 |
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atropos
|
public |
trim adapters from high-throughput sequencing reads
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2024-12-19 |
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bioconductor-spikein
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public |
Affymetrix Spike-In Experiment Data
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2024-12-19 |
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bioconductor-makecdfenv
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public |
CDF Environment Maker
|
2024-12-19 |
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bioconductor-panp
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public |
Presence-Absence Calls from Negative Strand Matching Probesets
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2024-12-19 |
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bioconductor-cardinal
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public |
A mass spectrometry imaging toolbox for statistical analysis
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2024-12-19 |
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bioconductor-flowtime
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public |
Annotation and analysis of biological dynamical systems using flow cytometry
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2024-12-19 |
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bioconductor-cghregions
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public |
Dimension Reduction for Array CGH Data with Minimal Information Loss.
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2024-12-19 |
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r-hemdag
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public |
a collection of Hierarchical Ensemble Methods (HEMs) for Directed Acyclic Graphs (DAGs).
|
2024-12-19 |
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bioconductor-cormotif
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public |
Correlation Motif Fit
|
2024-12-19 |
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dbghaplo
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public |
Haplotyping small sequences from heterogeneous long-read sequencing samples with a SNP-encoded positional de Bruijn Graph.
|
2024-12-19 |
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bioconductor-metabocoreutils
|
public |
Core Utils for Metabolomics Data
|
2024-12-19 |
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bioconductor-cytomem
|
public |
Marker Enrichment Modeling (MEM)
|
2024-12-19 |
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hits
|
public |
Utilities for processing high-throughput sequencing experiments.
|
2024-12-19 |
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bioconductor-cytodx
|
public |
Robust prediction of clinical outcomes using cytometry data without cell gating
|
2024-12-19 |
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bioconductor-reactomegsa.data
|
public |
Companion data package for the ReactomeGSA package
|
2024-12-19 |
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r-cp4p
|
public |
Functions to check whether a vector of p-values respects the assumptions of FDR (false discovery rate) control procedures and to compute adjusted p-values.
|
2024-12-19 |
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bioconductor-affydata
|
public |
Affymetrix Data for Demonstration Purpose
|
2024-12-19 |
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r-mutoss
|
public |
Designed to ease the application and comparison of multiple hypothesis testing procedures for FWER, gFWER, FDR and FDX. Methods are standardized and usable by the accompanying 'mutossGUI'.
|
2024-12-19 |
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bioconductor-abarray
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public |
Microarray QA and statistical data analysis for Applied Biosystems Genome Survey Microrarray (AB1700) gene expression data.
|
2024-12-19 |
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bioconductor-fedup
|
public |
Fisher's Test for Enrichment and Depletion of User-Defined Pathways
|
2024-12-19 |
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haproh
|
public |
Identify runs of homozygosity (hapROH) and contamination (hapCon) in low coverage ancient human DNA data (1240K SNPs) using modern reference panel
|
2024-12-19 |
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bioconductor-rain
|
public |
Rhythmicity Analysis Incorporating Non-parametric Methods
|
2024-12-19 |
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bioconductor-paircompviz
|
public |
Multiple comparison test visualization
|
2024-12-19 |
|
bioconductor-dstruct
|
public |
Identifying differentially reactive regions from RNA structurome profiling data
|
2024-12-19 |
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python-bioext
|
public |
A few handy bioinformatics tools not already in BioPython
|
2024-12-19 |
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bioconductor-biocviews
|
public |
Categorized views of R package repositories
|
2024-12-19 |
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bioconductor-a4classif
|
public |
Automated Affymetrix Array Analysis Classification Package
|
2024-12-19 |
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bioconductor-stategra
|
public |
Classes and methods for multi-omics data integration
|
2024-12-19 |
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bioconductor-aracne.networks
|
public |
ARACNe-inferred gene networks from TCGA tumor datasets
|
2024-12-19 |
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bioconductor-curatedbladderdata
|
public |
Bladder Cancer Gene Expression Analysis
|
2024-12-19 |
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bioconductor-cghcall
|
public |
Calling aberrations for array CGH tumor profiles.
|
2024-12-19 |
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bioconductor-cycle
|
public |
Significance of periodic expression pattern in time-series data
|
2024-12-19 |
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bioconductor-flowclean
|
public |
flowClean
|
2024-12-18 |
|
bioconductor-mspurity
|
public |
Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
|
2024-12-18 |
|
bioconductor-simat
|
public |
GC-SIM-MS data processing and alaysis tool
|
2024-12-18 |
|
bioconductor-flowmeans
|
public |
Non-parametric Flow Cytometry Data Gating
|
2024-12-18 |
|
bioconductor-chimphumanbraindata
|
public |
Chimp and human brain data package
|
2024-12-18 |
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bioconductor-consensusclusterplus
|
public |
ConsensusClusterPlus
|
2024-12-18 |
|
disco
|
public |
Multi-threaded Distributed Memory Overlap-Layout-Consensus (OLC) Metagenome Assembler
|
2024-12-18 |
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bioconductor-diggitdata
|
public |
Example data for the diggit package
|
2024-12-18 |
|
arcs
|
public |
Scaffolding genome sequence assemblies using linked or long reads
|
2024-12-18 |
|
bioconductor-vsn
|
public |
Variance stabilization and calibration for microarray data
|
2024-12-18 |
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bioconductor-tronco
|
public |
TRONCO, an R package for TRanslational ONCOlogy
|
2024-12-18 |
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bioconductor-dorothea
|
public |
Collection Of Human And Mouse TF Regulons
|
2024-12-18 |
|
bioconductor-flowbeads
|
public |
flowBeads: Analysis of flow bead data
|
2024-12-18 |
|
bioconductor-rcellminer
|
public |
rcellminer: Molecular Profiles, Drug Response, and Chemical Structures for the NCI-60 Cell Lines
|
2024-12-18 |
|
anchorwave
|
public |
Sensitive alignment of genomes with high sequence diversity, extensive structural polymorphism, and whole-genome duplication variation
|
2024-12-18 |
