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bioconda / packages / bioconductor-cytomem 1.10.0

Marker Enrichment Modeling (MEM)

Installers

  • noarch v1.10.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-cytomem

Description

MEM, Marker Enrichment Modeling, automatically generates and displays quantitative labels for cell populations that have been identified from single-cell data. The input for MEM is a dataset that has pre-clustered or pre-gated populations with cells in rows and features in columns. Labels convey a list of measured features and the features' levels of relative enrichment on each population. MEM can be applied to a wide variety of data types and can compare between MEM labels from flow cytometry, mass cytometry, single cell RNA-seq, and spectral flow cytometry using RMSD.


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