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Package Name Access Summary Updated
bioconductor-epialleler public Fast, Epiallele-Aware Methylation Caller and Reporter 2024-12-21
orthologer public Establish orthology among fasta files. 2024-12-21
bioconductor-beadarrayexampledata public Example data for the beadarray package 2024-12-21
bioconductor-biomformat public An interface package for the BIOM file format 2024-12-21
kraken2 public Kraken2 is a system for assigning taxonomic labels to short DNA sequences, usually obtained through metagenomic studies. 2024-12-21
r-wasabi public Prepare Sailfish and Salmon output for downstream analysis 2024-12-21
bioconductor-phipdata public Container for PhIP-Seq Experiments 2024-12-21
bioconductor-alabaster.string public Save and Load Biostrings to/from File 2024-12-21
mlst public Scan contig files against PubMLST typing schemes 2024-12-21
bioconductor-raggedexperiment public Representation of Sparse Experiments and Assays Across Samples 2024-12-21
bioconductor-gsca public GSCA: Gene Set Context Analysis 2024-12-21
bioconductor-annotationhub public Client to access AnnotationHub resources 2024-12-21
bioconductor-uniprot.ws public R Interface to UniProt Web Services 2024-12-21
bioconductor-scmitomut public Single-cell Mitochondrial Mutation Analysis Tool 2024-12-21
bioconductor-multiassayexperiment public Software for the integration of multi-omics experiments in Bioconductor 2024-12-21
bioconductor-biomart public Interface to BioMart databases (i.e. Ensembl) 2024-12-21
r-pore public An R package to enable organisation and visualisation of nanopore sequencing data 2024-12-21
bioconductor-alabaster.base public Save Bioconductor Objects To File 2024-12-21
bioconductor-msdata public Various Mass Spectrometry raw data example files 2024-12-21
r-leidenbase public An R to C interface that runs the Leiden community detection algorithm to find a basic partition 2024-12-21
genomic_address_service public Genomic Address Service: De novo clustering and cluster address assignment 2024-12-20
quantms-utils public Python package with scripts and helpers for the quantms workflow. 2024-12-20
tower-cli public The Tower CLI an interface to Nextflow Tower via the CLI 2024-12-20
mira-moods public MOODS: Motif Occurrence Detection Suite 2024-12-20
ms2deepscore public Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity 2024-12-20
genenotebook public A colleborative notebook for comparative genomics 2024-12-20
bioconductor-imman public Interlog protein network reconstruction by Mapping and Mining ANalysis 2024-12-20
bioconductor-rrdpdata public Databases for the Default RDP Classifier 2024-12-20
bioconductor-rhdf5client public Access HDF5 content from HDF Scalable Data Service 2024-12-20
bioconductor-transomics2cytoscape public A tool set for 3D Trans-Omic network visualization with Cytoscape 2024-12-20
bioconductor-scanmir public scanMiR 2024-12-20
bioconductor-adverscarial public adverSCarial, generate and analyze the vulnerability of scRNA-seq classifier to adversarial attacks 2024-12-20
bioconductor-saigegds public Scalable Implementation of Generalized mixed models using GDS files in Phenome-Wide Association Studies 2024-12-20
bioconductor-memes public motif matching, comparison, and de novo discovery using the MEME Suite 2024-12-20
bioconductor-geomxtools public NanoString GeoMx Tools 2024-12-20
bioconductor-sictools public Find SNV/Indel differences between two bam files with near relationship 2024-12-20
bioconductor-tiledbarray public Using TileDB as a DelayedArray Backend 2024-12-20
bioconductor-delayedrandomarray public Delayed Arrays of Random Values 2024-12-20
bioconductor-sketchr public An R interface for python subsampling/sketching algorithms 2024-12-20
bioconductor-methtargetedngs public Perform Methylation Analysis on Next Generation Sequencing Data 2024-12-20
bioconductor-residualmatrix public Creating a DelayedMatrix of Regression Residuals 2024-12-20
bioconductor-clustirr public Clustering of immune receptor repertoires 2024-12-20
bioconductor-gbscleanr public Error correction tool for noisy genotyping by sequencing (GBS) data 2024-12-20
bioconductor-scaledmatrix public Creating a DelayedMatrix of Scaled and Centered Values 2024-12-20
bioconductor-maskbad public Masking probes with binding affinity differences 2024-12-20
bioconductor-sqldataframe public Representation of SQL tables in DataFrame metaphor 2024-12-20
bioconductor-beachmat public Compiling Bioconductor to Handle Each Matrix Type 2024-12-20
bioconductor-bandits public BANDITS: Bayesian ANalysis of DIfferenTial Splicing 2024-12-20
genoboo public A collaborative notebook for comparative genomics (active fork of GeneNoteBook) 2024-12-20
bioconductor-trna public Analyzing tRNA sequences and structures 2024-12-20
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