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bioconda / packages / bioconductor-scmitomut 1.2.0

Single-cell Mitochondrial Mutation Analysis Tool

Installers

  • osx-64 v1.2.0
  • linux-64 v1.2.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-scmitomut

Description

This package is designed for calling lineage-informative mitochondrial mutations using single-cell sequencing data, such as scRNASeq and scATACSeq (preferably the latter due to RNA editing issues). It includes functions for mutation calling and visualization. Mutation calling is done using beta-binomial distribution.


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