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bioconductor-consensusseeker
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public |
Detection of consensus regions inside a group of experiences using genomic positions and genomic ranges
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2024-12-26 |
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bioconductor-r3cseq
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public |
Analysis of Chromosome Conformation Capture and Next-generation Sequencing (3C-seq)
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2024-12-26 |
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bioconductor-chromheatmap
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public |
Heat map plotting by genome coordinate
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2024-12-26 |
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bioconductor-ideoviz
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public |
Plots data (continuous/discrete) along chromosomal ideogram
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2024-12-26 |
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r-sigqc
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public |
Provides gene signature quality control metrics in publication ready plots. Namely, enables the visualization of properties such as expression, variability, correlation, and comparison of methods of standardisation and scoring metrics.
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2024-12-26 |
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bioconductor-motifdb
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public |
An Annotated Collection of Protein-DNA Binding Sequence Motifs
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2024-12-26 |
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bioconductor-scpipe
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public |
Pipeline for single cell multi-omic data pre-processing
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2024-12-26 |
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bioconductor-enrichmentbrowser
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public |
Seamless navigation through combined results of set-based and network-based enrichment analysis
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2024-12-26 |
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bioconductor-tigre
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public |
Transcription factor Inference through Gaussian process Reconstruction of Expression
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2024-12-26 |
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bioconductor-gseabase
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public |
Gene set enrichment data structures and methods
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2024-12-26 |
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bioconductor-preda
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public |
Position Related Data Analysis
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2024-12-26 |
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bioconductor-globaltest
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public |
Testing Groups of Covariates/Features for Association with a Response Variable, with Applications to Gene Set Testing
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2024-12-26 |
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bioconductor-codelink
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public |
Manipulation of Codelink microarray data
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2024-12-26 |
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bioconductor-mgfm
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public |
Marker Gene Finder in Microarray gene expression data
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2024-12-26 |
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bioconductor-semdist
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public |
Information Accretion-based Function Predictor Evaluation
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2024-12-26 |
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bioconductor-idiogram
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public |
idiogram
|
2024-12-26 |
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bioconductor-mirnameconverter
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public |
Convert miRNA Names to Different miRBase Versions
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2024-12-26 |
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r-basejump
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public |
Base functions for bioinformatics and R package development.
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2024-12-26 |
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bioconductor-liquidassociation
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public |
LiquidAssociation
|
2024-12-26 |
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bioconductor-apcomplex
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public |
Estimate protein complex membership using AP-MS protein data
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2024-12-26 |
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bioconductor-esetvis
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public |
Visualizations of expressionSet Bioconductor object
|
2024-12-26 |
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bioconductor-somaticsignatures
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public |
Somatic Signatures
|
2024-12-26 |
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bioconductor-riboprofiling
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public |
Ribosome Profiling Data Analysis: from BAM to Data Representation and Interpretation
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2024-12-26 |
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trinity
|
public |
Trinity assembles transcript sequences from Illumina RNA-Seq data.
|
2024-12-26 |
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r-bcbiobase
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public |
Base functions and generics for bcbio R packages.
|
2024-12-26 |
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bioconductor-hgu133plus2.db
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public |
Affymetrix Affymetrix HG-U133_Plus_2 Array annotation data (chip hgu133plus2)
|
2024-12-26 |
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bioconductor-lumihumanall.db
|
public |
Illumina Human Illumina expression annotation data (chip lumiHumanAll) assembled using data from public repositories
|
2024-12-26 |
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bioconductor-epivizrdata
|
public |
Data Management API for epiviz interactive visualization app
|
2024-12-26 |
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bioconductor-compepitools
|
public |
Tools for computational epigenomics
|
2024-12-26 |
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bioconductor-hgu133a2.db
|
public |
Affymetrix Affymetrix HG-U133A_2 Array annotation data (chip hgu133a2)
|
2024-12-26 |
|
bioconductor-hgu95av2.db
|
public |
Affymetrix Affymetrix HG U95Av2 Array annotation data (chip hgu95av2)
|
2024-12-26 |
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bioconductor-variantfiltering
|
public |
Filtering of coding and non-coding genetic variants
|
2024-12-26 |
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bioconductor-phastcons100way.ucsc.hg19
|
public |
Store UCSC phastCons conservation scores for the human genome (hg19) calculated from multiple alignments with other 99 vertebrate species.
|
2024-12-26 |
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bioconductor-aspli
|
public |
Analysis of Alternative Splicing Using RNA-Seq
|
2024-12-26 |
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bioconductor-trackviewer
|
public |
A R/Bioconductor package with web interface for drawing elegant interactive tracks or lollipop plot to facilitate integrated analysis of multi-omics data
|
2024-12-26 |
|
bioconductor-chimeraviz
|
public |
Visualization tools for gene fusions
|
2024-12-26 |
|
bioconductor-hgu133a.db
|
public |
Affymetrix Affymetrix HG-U133A Array annotation data (chip hgu133a)
|
2024-12-26 |
|
bioconductor-tvtb
|
public |
TVTB: The VCF Tool Box
|
2024-12-26 |
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bioconductor-genomicinteractions
|
public |
Utilities for handling genomic interaction data
|
2024-12-25 |
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bioconductor-cummerbund
|
public |
Analysis, exploration, manipulation, and visualization of Cufflinks high-throughput sequencing data.
|
2024-12-25 |
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bioconductor-pviz
|
public |
Peptide Annotation and Data Visualization using Gviz
|
2024-12-25 |
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bioconductor-ping
|
public |
Probabilistic inference for Nucleosome Positioning with MNase-based or Sonicated Short-read Data
|
2024-12-25 |
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bioconductor-mirintegrator
|
public |
Integrating microRNA expression into signaling pathways for pathway analysis
|
2024-12-25 |
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bioconductor-dexseq
|
public |
Inference of differential exon usage in RNA-Seq
|
2024-12-25 |
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bioconductor-ggbio
|
public |
Visualization tools for genomic data
|
2024-12-25 |
|
bioconductor-gviz
|
public |
Plotting data and annotation information along genomic coordinates
|
2024-12-25 |
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bioconductor-geneplotter
|
public |
Graphics related functions for Bioconductor
|
2024-12-25 |
|
bioconductor-bsgenome
|
public |
Software infrastructure for efficient representation of full genomes and their SNPs
|
2024-12-25 |
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bioconductor-ensembldb
|
public |
Utilities to create and use Ensembl-based annotation databases
|
2024-12-25 |
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bioconductor-pathview
|
public |
a tool set for pathway based data integration and visualization
|
2024-12-25 |
