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sv2
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public |
Support Vector Structural Variation Genotyper
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2023-06-16 |
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upload-test-0fb23b24
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public |
No Summary
|
2023-06-16 |
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perl-text-levenshteinxs
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public |
An XS implementation of the Levenshtein edit distance
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2023-06-16 |
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upload-test-6e0c294d
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public |
No Summary
|
2023-06-16 |
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upload-test-cd1c268b
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public |
No Summary
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2023-06-16 |
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mlpy
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public |
mlpy is a Python module for Machine Learning built on top of NumPy/SciPy and the GNU Scientific Libraries.
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2023-06-16 |
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jvarkit-msa2vcf
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public |
Writes a VCF from a multiple sequence alignment (MSA) in CLUSTAW or a FASTA format
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2023-06-16 |
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bioconductor-mlm4omics
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public |
To conduct Bayesian inference regression for responses with multilevel explanatory variables and missing values; It uses function from 'Stan', a software to implement posterior sampling using Hamiltonian MC and its variation Non-U-Turn algorithms. It implements the posterior sampling of regression coefficients from the multilevel regression models. The package has two main functions to handle not-missing-at-random missing responses and left-censored with not-missing-at random responses. The purpose is to provide a similar format as the other R regression functions but using 'Stan' models.
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2023-06-16 |
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scelvis
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public |
SCelVis - web-based visualization of single-cell data
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2023-06-16 |
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upload-test-699add02
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public |
No Summary
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2023-06-16 |
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clusterpicker
|
public |
The Cluster Picker identifies clusters in newick-formatted trees containing thousands of sequences within a few minutes.
|
2023-06-16 |
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bioconductor-explorase
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public |
GUI for exploratory data analysis of systems biology data
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2023-06-16 |
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mhcnuggets
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public |
MHCnuggets: Neoantigen peptide MHC binding prediction for class I and II
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2023-06-16 |
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upload-test-1434cfee
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public |
No Summary
|
2023-06-16 |
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upload-test-ca12a6b2
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public |
No Summary
|
2023-06-16 |
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happer
|
public |
Minimal Python library for generating haplotype sequences.
|
2023-06-16 |
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upload-test-c4934725
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public |
No Summary
|
2023-06-16 |
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ma
|
public |
MA - The Modular Aligner
|
2023-06-16 |
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perl-cg-pipeline
|
public |
Perl libraries required for CG-Pipeline.
|
2023-06-16 |
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perl-lyve-set
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public |
Perl libraries required for Lyve-SET.
|
2023-06-16 |
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upload-test-7d554ce6
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public |
No Summary
|
2023-06-16 |
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upload-test-e367bbe2
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public |
No Summary
|
2023-06-16 |
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kipoi-utils
|
public |
kipoi-utils: utils used in various packages related to kipoi
|
2023-06-16 |
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kipoi-conda
|
public |
kipoi-conda: conda/pip related functionality used by Kipoi
|
2023-06-16 |
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upload-test-7674855a
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public |
No Summary
|
2023-06-16 |
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upload-test-896cbd9b
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public |
No Summary
|
2023-06-16 |
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sexdeterrmine
|
public |
A python script carry out calculate the relative coverage of X and Y chromosomes, and their associated error bars, out of capture data.
|
2023-06-16 |
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capc-map
|
public |
Analysis software for Capture-C data
|
2023-06-16 |
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r-kaos
|
public |
Sequences encoding by using the chaos game representation. Löchel et al. (2019) <doi:10.1101/575324>.
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2023-06-16 |
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upload-test-e382a707
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public |
No Summary
|
2023-06-16 |
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scvis
|
public |
scvis is a python package for dimension reduction of high-dimensional biological data, especially single-cell RNA-sequencing (scRNA-seq) data.
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2023-06-16 |
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jvarkit-bam2wig
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public |
Bam to fixedStep Wiggle converter, or BED GRAPH.
|
2023-06-16 |
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jvarkit-bam2svg
|
public |
BAM to Scalar Vector Graphics (SVG)
|
2023-06-16 |
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magpurify
|
public |
Identify and remove incorrectly binned contigs from metagenome-assembled genomes.
|
2023-06-16 |
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upload-test-c3538ea4
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public |
No Summary
|
2023-06-16 |
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scaden
|
public |
Cell type deconvolution using single cell data
|
2023-06-16 |
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deeplift
|
public |
DeepLIFT (Deep Learning Important FeaTures)
|
2023-06-16 |
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cesm
|
public |
The Community Earth System Model (CESM) is a coupled climate model for simulating Earth’s climate system
|
2023-06-16 |
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pbgcpp
|
public |
pbgcpp - GenomicConsensus in C++
|
2023-06-16 |
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pipelign
|
public |
A pipeline for automated multiple sequence alignment, particularly of viral sequences.
|
2023-06-16 |
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kronos
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public |
Kronos is a highly flexible Python-based software tool that mainly enables bioinformatics developers, i.e. bioinformaticians who develop workflows for analyzing genomic data, to quickly make a workflow.
|
2023-06-16 |
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perl-dumbbench
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public |
More reliable benchmarking with the least amount of thinking
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2023-06-16 |
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perl-archive-tar-wrapper
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public |
API wrapper around the 'tar' utility
|
2023-06-16 |
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perl-test-lectrotest
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public |
Easy, automatic, specification-based tests
|
2023-06-16 |
|
amas
|
public |
Calculate various summary statistics on a multiple sequence alignment
|
2023-06-16 |
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bioconductor-mapkl
|
public |
A Hybrid Feature Selection method for gene expression data
|
2023-06-16 |
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collect-columns
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public |
Retrieve a column for each in a set of tables, placing them in a single output table.
|
2023-06-16 |
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perl-devel-checkos
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public |
check what OS we're running on
|
2023-06-16 |
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perl-moosex-object-pluggable
|
public |
Make your classes pluggable
|
2023-06-16 |
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wgs2ncbi
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public |
Toolkit for preparing genomes for submission to NCBI
|
2023-06-16 |
