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seq-to-first-iso
|
public |
Compute first two isotopologues intensity from peptide sequence
|
2023-06-16 |
|
magicblast
|
public |
NCBI BLAST next generation read mapper
|
2023-06-16 |
|
deepstats
|
public |
A statistical and dataviz toolbox for deeptools, genomic signals, and more.
|
2023-06-16 |
|
mobidic-mpa
|
public |
MPA: MoBiDiC Prioritization Algorithm
|
2023-06-16 |
|
hca-matrix-downloader
|
public |
Python client for the HCA DCP matrix service
|
2023-06-16 |
|
guessmylt
|
public |
Software to guess the RNA-Seq library type.
|
2023-06-16 |
|
hmmratac
|
public |
Peak caller for ATAC-seq data
|
2023-06-16 |
|
ripser
|
public |
Ripser: efficient computation of Vietoris–Rips persistence barcodes.
|
2023-06-16 |
|
music-deconvolution
|
public |
Multi-subject single cell deconvolution
|
2023-06-16 |
|
chunked-scatter
|
public |
Chunk and scatter the regions in a bed or sequence dict file
|
2023-06-16 |
|
wisestork
|
public |
Within-sample CNV calling
|
2023-06-16 |
|
biobasehttptools
|
public |
Tools for querying bioinformatics web resources
|
2023-06-16 |
|
centreseq
|
public |
Fast generation of core genome from bacterial strains
|
2023-06-16 |
|
upload-test-209fe4ed
|
public |
No Summary
|
2023-06-16 |
|
paragraph
|
public |
Graph realignment tools for structural variants
|
2023-06-16 |
|
upload-test-5d251111
|
public |
No Summary
|
2023-06-16 |
|
ncbi-amr
|
public |
AMRFinder find acquired antimicrobial resistance genes in protein or nucleotide sequences.
|
2023-06-16 |
|
samplot
|
public |
Plot structural variant signals from BAMs and CRAMs.
|
2023-06-16 |
|
stoatydive
|
public |
StoatyDive is a tool to evaluate and classify predicted peak profiles to assess the binding specificity of a protein to its targets.
|
2023-06-16 |
|
triqler
|
public |
A combined identification and quantification error model of label-free protein quantification
|
2023-06-16 |
|
upload-test-d096a0a3
|
public |
No Summary
|
2023-06-16 |
|
hint
|
public |
HiNT is a computational method for detecting copy number variations and translocations from Hi-C data
|
2023-06-16 |
|
circle-map
|
public |
Circular DNA analysis tools
|
2023-06-16 |
|
r-freerange
|
public |
Generate and manipulate genomic ranges.
|
2023-06-16 |
|
scvis_galaxy
|
public |
scvis is a python package for dimension reduction of high-dimensional biological data, especially single-cell RNA-sequencing (scRNA-seq) data.
|
2023-06-16 |
|
pal2nal
|
public |
robust conversion of protein sequence alignments into the corresponding codon alignments
|
2023-06-16 |
|
seqan
|
public |
SeqAn is an open source C++ library of efficient algorithms and data structures for the analysis of sequences with the focus on biological data.
|
2023-06-16 |
|
perl-devel-cover
|
public |
Code coverage metrics for Perl
|
2023-06-16 |
|
entrezpy
|
public |
Entrezpy is a dedicated Python library to interact with NCBI Entrez databases
|
2023-06-16 |
|
tapestry
|
public |
Validate and edit small eukaryotic genome assemblies
|
2023-06-16 |
|
perl-b-debug
|
public |
print debug info about ops
|
2023-06-16 |
|
opencontactcli
|
public |
Static contact mapping algorithm to identify potential peptide biomimetics from protein interaction partner structure files.
|
2023-06-16 |
|
rsidx
|
public |
Library for indexing VCF files for random access searches by rsID
|
2023-06-16 |
|
upload-test-c108e146
|
public |
No Summary
|
2023-06-16 |
|
perl-parallel-iterator
|
public |
Simple parallel execution
|
2023-06-16 |
|
upload-test-c8bad2eb
|
public |
No Summary
|
2023-06-16 |
|
purple-bio
|
public |
Picking Unique Relevant Peptides for viraL Experiments
|
2023-06-16 |
|
pgcgap
|
public |
A prokaryotic genomics and comparative genomics analysis pipeline
|
2023-06-16 |
|
telescope
|
public |
Single locus resolution of Transposable ELEment expression.
|
2023-06-16 |
|
colombo
|
public |
A software framework equipped with a GUI for the prediction of genomic islands (GIs) in prokaryotes.
|
2023-06-16 |
|
trnanalysis
|
public |
tRNA analysis pipeline
|
2023-06-16 |
|
rnasamba
|
public |
A tool for computing the coding potential of RNA transcript sequences using deep learning.
|
2023-06-16 |
|
upload-test-ec2087bc
|
public |
No Summary
|
2023-06-16 |
|
r-popgenreport
|
public |
Provides beginner friendly framework to analyse population genetic data. Based on 'adegenet' objects it uses 'knitr' to create comprehensive reports on spatial genetic data. For detailed information how to use the package refer to the comprehensive tutorials or visit <http://www.popgenreport.org/>.
|
2023-06-16 |
|
r-mmod
|
public |
Provides functions for measuring population divergence from genotypic data.
|
2023-06-16 |
|
upload-test-1f20d283
|
public |
No Summary
|
2023-06-16 |
|
perl-const-fast
|
public |
Facility for creating read-only scalars, arrays, and hashes
|
2023-06-16 |
|
perl-bignum
|
public |
Transparent BigNumber support for Perl
|
2023-06-16 |
|
r-hierfstat
|
public |
Allows the estimation of hierarchical F-statistics from haploid or diploid genetic data with any numbers of levels in the hierarchy, following the algorithm of Yang (Evolution, 1998, 52(4):950-956; <DOI:10.2307/2411227>. Functions are also given to test via randomisations the significance of each F and variance components, using the likelihood-ratio statistics G.
|
2023-06-16 |
|
perl-math-bigrat
|
public |
Arbitrary big rational numbers
|
2023-06-16 |
