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bioconda / packages / mhcnuggets 2.4.1

MHCnuggets: Neoantigen peptide MHC binding prediction for class I and II

Installers

  • osx-64 v2.2
  • linux-64 v2.2
  • noarch v2.4.1

conda install

To install this package run one of the following:
conda install bioconda::mhcnuggets

Description

MHCnuggets

Welcome to MHCnuggets! Presumably you're here to do some peptide-MHC prediction and not because you were hungry.

Usage

For an overview of how to use MHCnuggets please refer to the Jupyter notebook called user_guide.ipynb in the repository

Installation

MHCnuggets is pip installable as:

pip install mhcnuggets

Required pacakges:

  • numpy
  • scipy
  • scikit-learn
  • tensorflow
  • keras

You might want to check if the Keras backend is configured to use the Tensforflow backend.


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