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mhcnuggets

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MHCnuggets: Neoantigen peptide MHC binding prediction for class I and II

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::mhcnuggets

Usage Tracking

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Downloads (Last 6 months): 0

Description

MHCnuggets

Welcome to MHCnuggets! Presumably you're here to do some peptide-MHC prediction and not because you were hungry.

Usage

For an overview of how to use MHCnuggets please refer to the Jupyter notebook called user_guide.ipynb in the repository

Installation

MHCnuggets is pip installable as:

pip install mhcnuggets

Required pacakges:

  • numpy
  • scipy
  • scikit-learn
  • tensorflow
  • keras

You might want to check if the Keras backend is configured to use the Tensforflow backend.

About

Summary

MHCnuggets: Neoantigen peptide MHC binding prediction for class I and II

Last Updated

Mar 29, 2023 at 21:04

License

Apache License

Total Downloads

15.4K

Supported Platforms

noarch

Unsupported Platforms

linux-64 Last supported version: 2.2
macOS-64 Last supported version: 2.2