| Package Name | Access | Summary | Updated |
|---|---|---|---|
| bioconductor-crisprbwa | public | BWA-based alignment of CRISPR gRNA spacer sequences | 2025-04-22 |
| bioconductor-epimix | public | EpiMix: an integrative tool for the population-level analysis of DNA methylation | 2025-04-22 |
| fastk | public | FastK is a k‑mer counter that is optimized for processing high quality DNA assembly data sets such as those produced with an Illumina instrument or a PacBio run in HiFi mode. | 2025-04-22 |
| bioconductor-xcoredata | public | data package for xcore | 2025-04-22 |
| bioconductor-vectrapolarisdata | public | Vectra Polaris and Vectra 3 multiplex single-cell imaging data | 2025-04-22 |
| metacortex | public | MetaCortex is an assembler for metagenomic, or environmental sequence data. | 2025-04-22 |
| bioconductor-weberdivechalcdata | public | Spatially-resolved transcriptomics and single-nucleus RNA-sequencing data from the locus coeruleus (LC) in postmortem human brain samples | 2025-04-22 |
| bioconductor-hicontacts | public | Analysing cool files in R with HiContacts | 2025-04-22 |
| r-cghseg | public | Dedicated to the analysis of CGH (Comparative Genomic Hybridization) array profiles using segmentation models. 'cghseg' package is intended to detect breakpoints from CGH profiles. It can handle both single and multiple profiles analysis, to perform segmentation, normalization and calling. Methods for joint segmentation are described in Picard and al. (2011). | 2025-04-22 |
| bioconductor-comapr | public | Crossover analysis and genetic map construction | 2025-04-22 |
| bioconductor-merfishdata | public | Collection of public MERFISH datasets | 2025-04-22 |
| bioconductor-bobafit | public | Refitting diploid region profiles using a clustering procedure | 2025-04-22 |
| bioconductor-extrachips | public | Additional functions for working with ChIP-Seq data | 2025-04-22 |
| bioconductor-ogre | public | Calculate, visualize and analyse overlap between genomic regions | 2025-04-22 |
| bioconductor-epimix.data | public | Data for the EpiMix package | 2025-04-22 |
| bioconductor-hicontactsdata | public | HiContacts companion data package | 2025-04-22 |
| bioconductor-tekrabber | public | An R package estimates the correlations of orthologs and transposable elements between two species | 2025-04-22 |
| bioconductor-sfedata | public | Example SpatialFeatureExperiment datasets | 2025-04-22 |
| bioconductor-katdetectr | public | Detection, Characterization and Visualization of Kataegis in Sequencing Data | 2025-04-22 |
| bioconductor-octad.db | public | Open Cancer TherApeutic Discovery (OCTAD) database | 2025-04-22 |
| bioconductor-signifinder | public | Implementations of transcriptional cancer signatures | 2025-04-22 |
| bioconductor-atacseqtfea | public | Transcription Factor Enrichment Analysis for ATAC-seq | 2025-04-22 |
| bioconductor-circseqaligntk | public | A toolkit for end-to-end analysis of RNA-seq data for circular genomes | 2025-04-22 |
| bioconductor-mafh5.gnomad.v3.1.2.grch38 | public | Minor allele frequency data from gnomAD version 3.1.2 for GRCh38 | 2025-04-22 |
| bioconductor-zenith | public | Gene set analysis following differential expression using linear (mixed) modeling with dream | 2025-04-22 |
