CMD + K

bioconductor-comapr

Community

Crossover analysis and genetic map construction

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-comapr

Usage Tracking

1.10.0
1.6.1
1.4.0
1.2.0
4 / 8 versions selected
Total downloads: 0

Description

comapr detects crossover intervals for single gametes from their haplotype states sequences and stores the crossovers in GRanges object. The genetic distances can then be calculated via the mapping functions using estimated crossover rates for maker intervals. Visualisation functions for plotting interval-based genetic map or cumulative genetic distances are implemented, which help reveal the variation of crossovers landscapes across the genome and across individuals.

About

Summary

Crossover analysis and genetic map construction

Information Last Updated

Apr 22, 2025 at 15:29

License

MIT + file LICENSE

Total Downloads

4.5K

Platforms

noarch Version: 1.10.0