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bioconductor-bobafit

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Refitting diploid region profiles using a clustering procedure

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-bobafit

Usage Tracking

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Description

This package provides a method to refit and correct the diploid region in copy number profiles. It uses a clustering algorithm to identify pathology-specific normal (diploid) chromosomes and then use their copy number signal to refit the whole profile. The package is composed by three functions: DRrefit (the main function), ComputeNormalChromosome and PlotCluster.

About

Summary

Refitting diploid region profiles using a clustering procedure

Last Updated

Jan 3, 2025 at 21:38

License

GPL (>= 3)

Total Downloads

4.2K

Supported Platforms

noarch