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bioconda / packages / bioconductor-bobafit 1.6.0

Refitting diploid region profiles using a clustering procedure

Installers

  • noarch v1.6.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-bobafit

Description

This package provides a method to refit and correct the diploid region in copy number profiles. It uses a clustering algorithm to identify pathology-specific normal (diploid) chromosomes and then use their copy number signal to refit the whole profile. The package is composed by three functions: DRrefit (the main function), ComputeNormalChromosome and PlotCluster.


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