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bioconductor-katdetectr

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Detection, Characterization and Visualization of Kataegis in Sequencing Data

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-katdetectr

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Description

Kataegis refers to the occurrence of regional hypermutation and is a phenomenon observed in a wide range of malignancies. Using changepoint detection katdetectr aims to identify putative kataegis foci from common data-formats housing genomic variants. Katdetectr has shown to be a robust package for the detection, characterization and visualization of kataegis.

About

Summary

Detection, Characterization and Visualization of Kataegis in Sequencing Data

Last Updated

Dec 31, 2024 at 20:52

License

GPL-3 + file LICENSE

Total Downloads

4.1K

Supported Platforms

noarch