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bioconductor-randpack
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public |
Randomization routines for Clinical Trials
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2024-12-16 |
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perl-statistics-r
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public |
No Summary
|
2024-12-16 |
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duplomap
|
public |
Tool designed to improve precision and recall of long-read alignments in segmental duplications.
|
2024-12-16 |
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igphyml
|
public |
IgPhyML is a program designed to build phylogenetic trees and test evolutionary hypotheses regarding B cell affinity maturation.
|
2024-12-16 |
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bioconductor-gsealm
|
public |
Linear Model Toolset for Gene Set Enrichment Analysis
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2024-12-16 |
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contammix
|
public |
estimation of mtDNA contamination from a set of potential contaminant genomes.
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2024-12-16 |
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bioconductor-massir
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public |
massiR: MicroArray Sample Sex Identifier
|
2024-12-16 |
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bioconductor-biodbchebi
|
public |
biodbChebi, a library for connecting to the ChEBI Database
|
2024-12-16 |
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bioconductor-spktools
|
public |
Methods for Spike-in Arrays
|
2024-12-16 |
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bioconductor-biodbncbi
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public |
biodbNcbi, a library for connecting to NCBI Databases.
|
2024-12-16 |
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bioconductor-methped
|
public |
A DNA methylation classifier tool for the identification of pediatric brain tumor subtypes
|
2024-12-16 |
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bioconductor-biodbnci
|
public |
biodbNci, a library for connecting to biodbNci, a library for connecting to the National Cancer Institute (USA) CACTUS Database
|
2024-12-16 |
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bioconductor-biodbuniprot
|
public |
biodbUniprot, a library for connecting to the Uniprot Database
|
2024-12-16 |
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bioconductor-noiseq
|
public |
Exploratory analysis and differential expression for RNA-seq data
|
2024-12-16 |
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bioconductor-biodbhmdb
|
public |
biodbHmdb, a library for connecting to the HMDB Database
|
2024-12-16 |
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bioconductor-factdesign
|
public |
Factorial designed microarray experiment analysis
|
2024-12-16 |
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bioconductor-michip
|
public |
MiChip Parsing and Summarizing Functions
|
2024-12-16 |
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bioconductor-sigsquared
|
public |
Gene signature generation for functionally validated signaling pathways
|
2024-12-16 |
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bioconductor-masigpro
|
public |
Significant Gene Expression Profile Differences in Time Course Gene Expression Data
|
2024-12-16 |
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bioconductor-qusage
|
public |
qusage: Quantitative Set Analysis for Gene Expression
|
2024-12-16 |
|
emvc-2
|
public |
An efficient SNV variant caller based on the expectation maximization algorithm.
|
2024-12-16 |
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bioconductor-acme
|
public |
Algorithms for Calculating Microarray Enrichment (ACME)
|
2024-12-16 |
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bioconductor-dyebias
|
public |
The GASSCO method for correcting for slide-dependent gene-specific dye bias
|
2024-12-16 |
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r-cdseq
|
public |
Estimate cell-type-specific gene expression profiles and sample-specific cell-type proportions simultaneously using bulk sequencing data. Kang et al. (2019) <doi:10.1371/journal.pcbi.1007510>.
|
2024-12-16 |
|
bioconductor-cma
|
public |
Synthesis of microarray-based classification
|
2024-12-16 |
|
bioconductor-readqpcr
|
public |
Read qPCR data
|
2024-12-16 |
|
bioconductor-help
|
public |
Tools for HELP data analysis
|
2024-12-16 |
|
contatester
|
public |
Compute the Allelic Balance of a sample from a VCF file.
|
2024-12-16 |
|
bioconductor-anf
|
public |
Affinity Network Fusion for Complex Patient Clustering
|
2024-12-16 |
|
bioconductor-clusterstab
|
public |
Compute cluster stability scores for microarray data
|
2024-12-16 |
|
perl-sanger-cgp-vcf
|
public |
a set of common perl utilities for generating consistent Vcf headers
|
2024-12-16 |
|
bioconductor-dfp
|
public |
Gene Selection
|
2024-12-16 |
|
bioconductor-rtca
|
public |
Open-source toolkit to analyse data from xCELLigence System (RTCA)
|
2024-12-16 |
|
bioconductor-cogena
|
public |
co-expressed gene-set enrichment analysis
|
2024-12-16 |
|
bioconductor-ddct
|
public |
The ddCt Algorithm for the Analysis of Quantitative Real-Time PCR (qRT-PCR)
|
2024-12-16 |
|
srahunter
|
public |
srahunter is a tool for processing SRA accession numbers.
|
2024-12-16 |
|
perl-bio-easel
|
public |
Perl modules and scripts for interfacing with Sean Eddy's C easel sequence analysis library using Perl's Inline.
|
2024-12-16 |
|
locityper
|
public |
Targeted genotyper for complex polymorphic loci from short and long read WGS.
|
2024-12-16 |
|
bioconductor-undo
|
public |
Unsupervised Deconvolution of Tumor-Stromal Mixed Expressions
|
2024-12-16 |
|
bioconductor-biobroom
|
public |
Turn Bioconductor objects into tidy data frames
|
2024-12-16 |
|
perl-inline-c
|
public |
C Language Support for Inline
|
2024-12-16 |
|
perl-sub-attribute
|
public |
Reliable subroutine attribute handlers
|
2024-12-16 |
|
bioconductor-piano
|
public |
Platform for integrative analysis of omics data
|
2024-12-16 |
|
perl-escape-houdini
|
public |
Perl API to Houdini, a zero-dependency C web escaping library
|
2024-12-16 |
|
perl-config-autoconf
|
public |
A module to implement some of AutoConf macros in pure perl.
|
2024-12-16 |
|
bioconductor-timecourse
|
public |
Statistical Analysis for Developmental Microarray Time Course Data
|
2024-12-16 |
|
methyldackel
|
public |
A (mostly) universal methylation extractor for BS-seq experiments. Formerly named PileOMeth.
|
2024-12-16 |
|
libsequence
|
public |
A C++ class library for evolutionary genetics.
|
2024-12-16 |
|
meme
|
public |
Motif-based sequence analysis tools.
|
2024-12-16 |
|
pycluster
|
public |
Clustering module for Python
|
2024-12-16 |
