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spacerextractor
|
public |
Extract CRISPR spacers from metagenome short reads.
|
2025-08-01 |
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ensembl-vep
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public |
Ensembl Variant Effect Predictor
|
2025-08-01 |
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libsequence
|
public |
A C++ class library for evolutionary genetics.
|
2025-08-01 |
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genometools-genometools
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public |
GenomeTools genome analysis system.
|
2025-07-31 |
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bcbio-gff
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public |
A Python library to read and write Generic Feature Format (GFF).
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2025-07-31 |
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gndiff
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public |
GNdiff compares scientific names from two files
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2025-07-31 |
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ezaai
|
public |
EzAAI is a suite of workflows for improved AAI calculation performance along with the novel module that provides hierarchical clustering analysis and dendrogram representation.
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2025-07-31 |
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cyvcf2
|
public |
A cython wrapper around htslib built for fast parsing of Variant Call Format (VCF) files
|
2025-07-31 |
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chewbbaca
|
public |
A complete suite for gene-by-gene schema creation and strain identification.
|
2025-07-31 |
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genome-uploader
|
public |
Python script to upload bins and MAGs in fasta format to ENA (European Nucleotide Archive).
|
2025-07-31 |
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bifrost-httr
|
public |
Pre-release version for testing purposes only
|
2025-07-31 |
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nomadic
|
public |
Mobile sequencing and analysis in real-time
|
2025-07-31 |
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changeo
|
public |
A bioinformatics toolkit for processing high-throughput lymphocyte receptor sequencing data.
|
2025-07-31 |
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ntcard
|
public |
Estimating k-mer coverage histogram of genomics data
|
2025-07-31 |
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cuttlefish
|
public |
Construction of the compacted de Bruijn graph efficiently
|
2025-07-31 |
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ghostz
|
public |
GHOSTZ is a highly efficient remote homologue detection tool
|
2025-07-31 |
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soapdenovo-trans
|
public |
No Summary
|
2025-07-31 |
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lsabgc
|
public |
lsaBGC-Pan - refined workflow for pan-BGC-omic evolutionary investigations.
|
2025-07-31 |
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blue-crab
|
public |
lossless nanopore pod5 <=> s/blow5 file conversion
|
2025-07-31 |
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jccirc
|
public |
circRNA assembler through integrated junction contigs
|
2025-07-31 |
|
r-pathosurveilr
|
public |
Utilities for interacting with the pathogensurveillance pipeline.
|
2025-07-31 |
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trtools
|
public |
Toolkit for genome-wide analysis of tandem repeats
|
2025-07-31 |
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rgi
|
public |
This tool provides a preliminary annotation of your DNA sequence(s) based upon the data available in The Comprehensive Antibiotic Resistance Database (CARD). Hits to genes tagged with Antibiotic Resistance ontology terms will be highlighted. As CARD expands to include more pathogens, genomes, plasmids, and ontology terms this tool will grow increasingly powerful in providing first-pass detection of antibiotic resistance associated genes. See license at CARD website
|
2025-07-31 |
|
ciri-full
|
public |
Full length circRNA reconstruction and quantification using BSJ and reverse overlap (RO) features.
|
2025-07-31 |
|
sspace_basic
|
public |
Scaffolding Pre-Assemblies After Contig Extension (SSPACE)
|
2025-07-31 |
